Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 MKNK2P1-201ENST00000437526 628 ntBASIC7.78□□□□□ -1.16
MACF1Q9UPN3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AC109322.1-201ENST00000524499 1264 ntBASIC7.78□□□□□ -1.16
MACF1Q9UPN3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 KRT18P27-201ENST00000427733 1299 ntBASIC7.78□□□□□ -1.16
MACF1Q9UPN3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AC011484.1-201ENST00000377652 1995 ntBASIC7.78□□□□□ -1.16
MACF1Q9UPN3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 TFP1-202ENST00000475455 1573 ntBASIC7.78□□□□□ -1.16
MACF1Q9UPN3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
MACF1Q9UPN3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC7.77□□□□□ -1.16
MACF1Q9UPN3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
MACF1Q9UPN3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC7.77□□□□□ -1.16
MACF1Q9UPN3 GPR53P-205ENST00000457298 1084 ntBASIC7.77□□□□□ -1.16
MACF1Q9UPN3 AC051619.7-201ENST00000568314 623 ntBASIC7.77□□□□□ -1.16
MACF1Q9UPN3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC7.77□□□□□ -1.16
MACF1Q9UPN3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC7.77□□□□□ -1.16
MACF1Q9UPN3 AC124864.1-201ENST00000623408 392 ntBASIC7.77□□□□□ -1.16
MACF1Q9UPN3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
MACF1Q9UPN3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC7.77□□□□□ -1.16
MACF1Q9UPN3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 AC108751.1-201ENST00000490852 363 ntBASIC7.77□□□□□ -1.17
MACF1Q9UPN3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 PAN3-AS1-201ENST00000563843 1351 ntBASIC7.77□□□□□ -1.17
MACF1Q9UPN3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 AC092910.1-201ENST00000482027 1129 ntBASIC7.77□□□□□ -1.17
MACF1Q9UPN3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 SPTSSB-204ENST00000617024 1292 ntBASIC7.77□□□□□ -1.17
MACF1Q9UPN3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 SNX1-214ENST00000625244 324 ntTSL 5 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 PACS1-203ENST00000524815 628 ntTSL 4 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
MACF1Q9UPN3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
MACF1Q9UPN3 STOM-202ENST00000347359 870 ntTSL 2 BASIC7.76□□□□□ -1.17
MACF1Q9UPN3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
MACF1Q9UPN3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC7.76□□□□□ -1.17
MACF1Q9UPN3 U91328.1-201ENST00000437528 223 ntBASIC7.76□□□□□ -1.17
MACF1Q9UPN3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC7.76□□□□□ -1.17
MACF1Q9UPN3 OR7E14P-202ENST00000530490 1290 ntBASIC7.76□□□□□ -1.17
MACF1Q9UPN3 MTDHP3-201ENST00000594186 672 ntBASIC7.76□□□□□ -1.17
MACF1Q9UPN3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
MACF1Q9UPN3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
MACF1Q9UPN3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
MACF1Q9UPN3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms