Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 AC079598.2-202ENST00000546624 1451 ntBASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 Z98044.1-201ENST00000632503 1764 ntBASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
PCDHGC3Q9UN70 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGC3Q9UN70 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 CRYGFP-201ENST00000418459 633 ntBASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 AL355075.4-201ENST00000554988 638 ntBASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 AL138781.2-201ENST00000617896 1843 ntBASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGC3Q9UN70 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 FITM1-202ENST00000559294 800 ntBASIC20■□□□□ 0.79
PCDHGC3Q9UN70 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 AC066615.1-201ENST00000640911 628 ntBASIC20■□□□□ 0.79
PCDHGC3Q9UN70 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGC3Q9UN70 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 AC093827.2-201ENST00000512654 315 ntBASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGC3Q9UN70 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms