Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 ZNF444P1-201ENST00000559497 298 ntBASIC19.31■□□□□ 0.68
EBF1Q9UH73 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.31■□□□□ 0.68
EBF1Q9UH73 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EBF1Q9UH73 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EBF1Q9UH73 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EBF1Q9UH73 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.31■□□□□ 0.68
EBF1Q9UH73 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
EBF1Q9UH73 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
EBF1Q9UH73 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.3■□□□□ 0.68
EBF1Q9UH73 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
EBF1Q9UH73 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.3■□□□□ 0.68
EBF1Q9UH73 CLEC4GP1-201ENST00000596555 870 ntBASIC19.3■□□□□ 0.68
EBF1Q9UH73 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
EBF1Q9UH73 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.3■□□□□ 0.68
EBF1Q9UH73 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.3■□□□□ 0.68
EBF1Q9UH73 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EBF1Q9UH73 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 AC009237.14-201ENST00000609975 1594 ntBASIC19.29■□□□□ 0.68
EBF1Q9UH73 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 HYMAI.1-201ENST00000620949 238 ntBASIC19.29■□□□□ 0.68
EBF1Q9UH73 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EBF1Q9UH73 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.29■□□□□ 0.68
EBF1Q9UH73 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.28■□□□□ 0.68
EBF1Q9UH73 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 AC083849.1-201ENST00000615227 514 ntBASIC19.28■□□□□ 0.68
EBF1Q9UH73 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
EBF1Q9UH73 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EBF1Q9UH73 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 KRT8P11-201ENST00000409686 1436 ntBASIC19.27■□□□□ 0.68
EBF1Q9UH73 AL162377.1-201ENST00000618844 1793 ntBASIC19.27■□□□□ 0.68
EBF1Q9UH73 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.27■□□□□ 0.68
EBF1Q9UH73 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms