Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRIT1Q9P2V4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.33■□□□□ 0.53
LRIT1Q9P2V4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 Z82202.1-201ENST00000623446 1880 ntBASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LRIT1Q9P2V4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 AC005332.1-201ENST00000577698 1310 ntBASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRIT1Q9P2V4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 AL023284.2-201ENST00000405850 579 ntBASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 VENTXP5-201ENST00000523979 775 ntBASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRIT1Q9P2V4 TREX1-205ENST00000625293 1783 ntBASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 ZNF444P1-201ENST00000559497 298 ntBASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 AL136038.3-201ENST00000561909 1096 ntBASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 LINC01311-201ENST00000565162 1445 ntBASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRIT1Q9P2V4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 SPDYE15P-201ENST00000424157 909 ntBASIC18.29■□□□□ 0.52
LRIT1Q9P2V4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms