Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
POLR1BQ9H9Y6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 TUBB8P6-201ENST00000436895 1288 ntBASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
POLR1BQ9H9Y6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 KRT18P16-201ENST00000510337 1294 ntBASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 AC116351.2-201ENST00000606540 1585 ntBASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
POLR1BQ9H9Y6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 AC093503.3-201ENST00000624917 2352 ntBASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 AC092720.2-201ENST00000602388 1665 ntBASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 INGX-201ENST00000359239 846 ntBASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 AC117947.1-201ENST00000427448 529 ntBASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 AP000692.2-201ENST00000608391 879 ntBASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 AC130371.2-201ENST00000619443 611 ntBASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
POLR1BQ9H9Y6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms