Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 AC134043.2-201ENST00000624206 2238 ntBASIC18.07■□□□□ 0.48
VCX3BQ9H321 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 KRT87P-202ENST00000534226 1464 ntBASIC18.07■□□□□ 0.48
VCX3BQ9H321 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.07■□□□□ 0.48
VCX3BQ9H321 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VCX3BQ9H321 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 AC233992.3-201ENST00000607491 485 ntBASIC18.06■□□□□ 0.48
VCX3BQ9H321 AC243732.1-201ENST00000612648 864 ntBASIC18.06■□□□□ 0.48
VCX3BQ9H321 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
VCX3BQ9H321 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VCX3BQ9H321 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 PCDHA12-202ENST00000613593 2588 ntBASIC18.05■□□□□ 0.48
VCX3BQ9H321 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 ZNF815P-204ENST00000434898 1737 ntBASIC18.05■□□□□ 0.48
VCX3BQ9H321 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
VCX3BQ9H321 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.05■□□□□ 0.48
VCX3BQ9H321 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VCX3BQ9H321 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 HLA-G-202ENST00000376815 851 ntBASIC18.04■□□□□ 0.48
VCX3BQ9H321 HLA-G-203ENST00000376818 1127 ntBASIC18.04■□□□□ 0.48
VCX3BQ9H321 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 SLC25A6P5-201ENST00000435663 894 ntBASIC18.04■□□□□ 0.48
VCX3BQ9H321 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.04■□□□□ 0.48
VCX3BQ9H321 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms