Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 FTCD-210ENST00000488577 447 ntTSL 322.91■■□□□ 1.263e-14■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-203ENST00000472367 794 ntTSL 321.16■□□□□ 0.983e-13■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-212ENST00000483588 688 ntTSL 320.13■□□□□ 0.813e-13■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.73■□□□□ 0.273e-13■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC16.15■□□□□ 0.183e-13■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-215ENST00000491009 863 ntTSL 215.72■□□□□ 0.113e-13■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC14.92□□□□□ -0.023e-13■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-207ENST00000478103 712 ntTSL 312.55□□□□□ -0.43e-13■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-201ENST00000460249 773 ntTSL 312.21□□□□□ -0.453e-13■■■□□ 19
XRN2Q9H0D6 LRRC75A-AS1-211ENST00000483140 936 ntTSL 25.76□□□□□ -1.493e-13■■■□□ 19
XRN2Q9H0D6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.014e-18■■■□□ 19
XRN2Q9H0D6 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)20.41■□□□□ 0.864e-18■■■□□ 19
XRN2Q9H0D6 ZC3H7A-208ENST00000572781 564 ntTSL 419.08■□□□□ 0.646e-7■■■□□ 19
XRN2Q9H0D6 ZC3H7A-213ENST00000575170 831 ntTSL 318.19■□□□□ 0.56e-7■■■□□ 19
XRN2Q9H0D6 ZC3H7A-205ENST00000571198 2343 ntTSL 215.69■□□□□ 0.16e-7■■■□□ 19
XRN2Q9H0D6 ZC3H7A-201ENST00000355758 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.886e-7■■■□□ 19
XRN2Q9H0D6 AKAP1-212ENST00000573326 1580 ntTSL 513.14□□□□□ -0.319e-7■■■□□ 19
XRN2Q9H0D6 AKAP1-208ENST00000572557 3098 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.649e-7■■■□□ 19
XRN2Q9H0D6 AKAP1-204ENST00000539273 3153 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.739e-7■■■□□ 19
XRN2Q9H0D6 AKAP1-203ENST00000481416 4089 ntTSL 59.84□□□□□ -0.839e-7■■■□□ 19
XRN2Q9H0D6 CARHSP1-215ENST00000570125 681 ntTSL 433.4■■■□□ 2.946e-7■■■□□ 19
XRN2Q9H0D6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.996e-7■■■□□ 19
XRN2Q9H0D6 CARHSP1-206ENST00000563815 1913 ntTSL 220.27■□□□□ 0.846e-7■■■□□ 19
XRN2Q9H0D6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.566e-7■■■□□ 19
XRN2Q9H0D6 CARHSP1-214ENST00000569572 578 ntTSL 317.35■□□□□ 0.376e-7■■■□□ 19
XRN2Q9H0D6 CARHSP1-207ENST00000565287 556 ntTSL 316.32■□□□□ 0.26e-7■■■□□ 19
XRN2Q9H0D6 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.326e-7■■■□□ 19
XRN2Q9H0D6 SLC22A18-210ENST00000492567 684 ntTSL 223.22■■□□□ 1.316e-7■■■□□ 19
XRN2Q9H0D6 GATAD2A-209ENST00000448576 271 ntTSL 334.26■■■■□ 3.087e-8■■■□□ 18.9
XRN2Q9H0D6 GATAD2A-210ENST00000457895 729 ntTSL 226.03■■□□□ 1.767e-8■■■□□ 18.9
XRN2Q9H0D6 GATAD2A-212ENST00000494516 640 ntTSL 224.16■■□□□ 1.467e-8■■■□□ 18.9
XRN2Q9H0D6 GATAD2A-204ENST00000417582 655 ntTSL 223.6■■□□□ 1.377e-8■■■□□ 18.9
XRN2Q9H0D6 GATAD2A-213ENST00000609040 1652 ntTSL 220.4■□□□□ 0.867e-8■■■□□ 18.9
XRN2Q9H0D6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.317e-8■■■□□ 18.9
XRN2Q9H0D6 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.33□□□□□ -1.242e-7■■■□□ 18.9
XRN2Q9H0D6 DLC1-205ENST00000506171 560 ntTSL 44.78□□□□□ -1.642e-7■■■□□ 18.9
XRN2Q9H0D6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.566e-11■■■□□ 18.9
XRN2Q9H0D6 TMEM9-211ENST00000497582 1075 ntTSL 327.17■■□□□ 1.946e-11■■■□□ 18.9
XRN2Q9H0D6 BICRA-202ENST00000594866 532 ntAPPRIS ALT2 TSL 226.56■■□□□ 1.843e-7■■■□□ 18.9
XRN2Q9H0D6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.716e-11■■■□□ 18.9
XRN2Q9H0D6 RGPD5-207ENST00000441344 541 ntTSL 424.77■■□□□ 1.566e-11■■■□□ 18.9
XRN2Q9H0D6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.496e-11■■■□□ 18.9
XRN2Q9H0D6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.68■■□□□ 1.221e-7■■■□□ 18.9
XRN2Q9H0D6 QKI-204ENST00000361758 6085 ntTSL 522.63■■□□□ 1.211e-7■■■□□ 18.9
XRN2Q9H0D6 RPL3-203ENST00000402527 1205 ntTSL 521.66■■□□□ 1.064e-10■■■□□ 18.9
XRN2Q9H0D6 TBC1D16-204ENST00000571872 567 ntTSL 520.41■□□□□ 0.863e-7■■■□□ 18.9
XRN2Q9H0D6 TMEM9-206ENST00000435310 507 ntTSL 220.37■□□□□ 0.856e-11■■■□□ 18.9
XRN2Q9H0D6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.28■□□□□ 0.681e-7■■■□□ 18.9
XRN2Q9H0D6 RGPD5-205ENST00000430736 563 ntTSL 418.89■□□□□ 0.616e-11■■■□□ 18.9
XRN2Q9H0D6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.3■□□□□ 0.521e-7■■■□□ 18.9
XRN2Q9H0D6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.51e-7■■■□□ 18.9
XRN2Q9H0D6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.326e-11■■■□□ 18.9
XRN2Q9H0D6 RPL3-206ENST00000453303 916 ntTSL 516.18■□□□□ 0.184e-10■■■□□ 18.9
XRN2Q9H0D6 TBC1D9B-217ENST00000522472 668 ntTSL 516.08■□□□□ 0.166e-6■■■□□ 18.9
XRN2Q9H0D6 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.166e-11■■■□□ 18.9
XRN2Q9H0D6 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.156e-11■■■□□ 18.9
XRN2Q9H0D6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.86□□□□□ -0.036e-11■■■□□ 18.9
XRN2Q9H0D6 TMEM9-205ENST00000414605 545 ntTSL 213.14□□□□□ -0.316e-11■■■□□ 18.9
XRN2Q9H0D6 TCAF1-202ENST00000392900 2513 ntTSL 212.94□□□□□ -0.342e-9■■■□□ 18.9
XRN2Q9H0D6 TBC1D9B-219ENST00000524222 927 ntTSL 512.16□□□□□ -0.466e-6■■■□□ 18.9
XRN2Q9H0D6 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC12.05□□□□□ -0.486e-11■■■□□ 18.9
XRN2Q9H0D6 TCAF1-206ENST00000485416 577 ntTSL 411.91□□□□□ -0.52e-9■■■□□ 18.9
XRN2Q9H0D6 RGPD5-201ENST00000016946 7253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.586e-11■■■□□ 18.9
XRN2Q9H0D6 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.68□□□□□ -1.181e-7■■■□□ 18.9
XRN2Q9H0D6 QKI-217ENST00000545607 846 ntTSL 56.44□□□□□ -1.381e-7■■■□□ 18.9
XRN2Q9H0D6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.64□□□□□ -1.671e-7■■■□□ 18.9
XRN2Q9H0D6 FLOT1-210ENST00000484168 1101 ntTSL 526■■□□□ 1.752e-7■■■□□ 18.9
XRN2Q9H0D6 FLOT1-208ENST00000470643 852 ntTSL 326■■□□□ 1.752e-7■■■□□ 18.9
XRN2Q9H0D6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.11■□□□□ 0.335e-6■■■□□ 18.9
XRN2Q9H0D6 CMIP-211ENST00000621537 4000 ntTSL 5 BASIC13.26□□□□□ -0.295e-6■■■□□ 18.9
XRN2Q9H0D6 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)13.68□□□□□ -0.222e-6■■■□□ 18.9
XRN2Q9H0D6 ATXN2L-210ENST00000562867 609 ntTSL 221.32■■□□□ 11e-6■■■□□ 18.9
XRN2Q9H0D6 GNB1L-204ENST00000453108 702 ntTSL 323.38■■□□□ 1.333e-6■■■□□ 18.9
XRN2Q9H0D6 GNB1L-206ENST00000481086 854 ntTSL 323.18■■□□□ 1.33e-6■■■□□ 18.9
XRN2Q9H0D6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.293e-6■■■□□ 18.9
XRN2Q9H0D6 GNB1L-205ENST00000460402 1197 ntTSL 321.59■■□□□ 1.053e-6■■■□□ 18.9
XRN2Q9H0D6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.38■■□□□ 1.013e-6■■■□□ 18.9
XRN2Q9H0D6 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.283e-6■■■□□ 18.9
XRN2Q9H0D6 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.67■□□□□ 0.13e-6■■■□□ 18.8
XRN2Q9H0D6 TFEB-213ENST00000425401 281 ntTSL 1 (best)26.48■■□□□ 1.833e-6■■■□□ 18.8
XRN2Q9H0D6 MARS-226ENST00000551892 748 ntTSL 324.53■■□□□ 1.523e-6■■■□□ 18.8
XRN2Q9H0D6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.393e-6■■■□□ 18.8
XRN2Q9H0D6 MARS-228ENST00000552371 699 ntTSL 313.46□□□□□ -0.253e-6■■■□□ 18.8
XRN2Q9H0D6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.28■■□□□ 1.162e-7■■■□□ 18.8
XRN2Q9H0D6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.142e-7■■■□□ 18.8
XRN2Q9H0D6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC22.04■■□□□ 1.122e-7■■■□□ 18.8
XRN2Q9H0D6 GPX4-209ENST00000593032 583 ntTSL 321.12■□□□□ 0.972e-7■■■□□ 18.8
XRN2Q9H0D6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.932e-7■■■□□ 18.8
XRN2Q9H0D6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.71■□□□□ 0.432e-7■■■□□ 18.8
XRN2Q9H0D6 ANO9-207ENST00000532094 5487 ntTSL 218.04■□□□□ 0.485e-7■■■□□ 18.8
XRN2Q9H0D6 ANO9-206ENST00000528927 2639 ntTSL 1 (best)15.76■□□□□ 0.115e-7■■■□□ 18.8
XRN2Q9H0D6 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.215e-7■■■□□ 18.8
XRN2Q9H0D6 LRRC75A-AS1-224ENST00000581718 574 ntTSL 222.3■■□□□ 1.162e-6■■■□□ 18.8
XRN2Q9H0D6 LRRC75A-AS1-229ENST00000584177 574 ntTSL 419.75■□□□□ 0.752e-6■■■□□ 18.8
XRN2Q9H0D6 LRRC75A-AS1-227ENST00000583400 712 ntTSL 412.46□□□□□ -0.412e-6■■■□□ 18.8
XRN2Q9H0D6 LRRC75A-AS1-222ENST00000580770 572 ntTSL 412.21□□□□□ -0.452e-6■■■□□ 18.8
XRN2Q9H0D6 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC11.66□□□□□ -0.542e-6■■■□□ 18.8
XRN2Q9H0D6 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC9.78□□□□□ -0.842e-6■■■□□ 18.8
XRN2Q9H0D6 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC10.37□□□□□ -0.753e-7■■■□□ 18.8
XRN2Q9H0D6 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.753e-7■■■□□ 18.8
Retrieved 100 of 21,068 protein–RNA pairs in 105.9 ms