Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 TSPY23P-201ENST00000440136 739 ntBASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 FAM87A-204ENST00000613235 858 ntBASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSBP3Q9BWW4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 AC092338.2-201ENST00000568827 1415 ntBASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 MIR1224-201ENST00000408193 85 ntBASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 AC007663.1-201ENST00000438948 1240 ntBASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 KRT18P57-201ENST00000443599 1254 ntBASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 AL353719.1-201ENST00000566847 864 ntBASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 AL023803.3-201ENST00000615559 522 ntBASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSBP3Q9BWW4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 AL512604.3-201ENST00000569583 964 ntBASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SSBP3Q9BWW4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 AC010203.1-204ENST00000548782 407 ntBASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.78■□□□□ 0.12
SSBP3Q9BWW4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms