Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
UPK3BQ9BT76 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 KRT18P22-201ENST00000402024 1347 ntBASIC13.19□□□□□ -0.3
UPK3BQ9BT76 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 TSPY14P-201ENST00000303979 915 ntBASIC13.19□□□□□ -0.3
UPK3BQ9BT76 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 AL390955.1-201ENST00000428694 934 ntBASIC13.19□□□□□ -0.3
UPK3BQ9BT76 FAM210CP-201ENST00000445714 574 ntBASIC13.19□□□□□ -0.3
UPK3BQ9BT76 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 EGLN1P1-201ENST00000531623 762 ntBASIC13.19□□□□□ -0.3
UPK3BQ9BT76 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
UPK3BQ9BT76 LINC01568-207ENST00000641790 1380 ntBASIC13.19□□□□□ -0.3
UPK3BQ9BT76 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 CRYGFP-201ENST00000418459 633 ntBASIC13.18□□□□□ -0.3
UPK3BQ9BT76 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 AC128688.1-201ENST00000487626 519 ntBASIC13.18□□□□□ -0.3
UPK3BQ9BT76 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 SLC25A1P4-201ENST00000567977 778 ntBASIC13.18□□□□□ -0.3
UPK3BQ9BT76 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 AC010947.1-201ENST00000623454 693 ntBASIC13.18□□□□□ -0.3
UPK3BQ9BT76 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
UPK3BQ9BT76 AC005082.1-201ENST00000413042 2259 ntBASIC13.18□□□□□ -0.3
UPK3BQ9BT76 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 AC018445.3-201ENST00000624177 1945 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 BX323043.1-201ENST00000641006 1765 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 KRT8P9-201ENST00000558927 1449 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms