Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.11■□□□□ 0.33
SPENQ96T58 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.11■□□□□ 0.33
SPENQ96T58 AC120114.3-201ENST00000611923 658 ntBASIC17.11■□□□□ 0.33
SPENQ96T58 AL157888.1-201ENST00000631930 593 ntBASIC17.11■□□□□ 0.33
SPENQ96T58 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.11■□□□□ 0.33
SPENQ96T58 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SPENQ96T58 HMGN1P19-201ENST00000436976 333 ntBASIC17.1■□□□□ 0.33
SPENQ96T58 DRAXINP1-201ENST00000437611 948 ntBASIC17.1■□□□□ 0.33
SPENQ96T58 AC092183.1-201ENST00000469884 875 ntBASIC17.1■□□□□ 0.33
SPENQ96T58 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.1■□□□□ 0.33
SPENQ96T58 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.1■□□□□ 0.33
SPENQ96T58 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SPENQ96T58 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.1■□□□□ 0.33
SPENQ96T58 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.1■□□□□ 0.33
SPENQ96T58 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SPENQ96T58 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.1■□□□□ 0.33
SPENQ96T58 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
SPENQ96T58 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPENQ96T58 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.1■□□□□ 0.33
SPENQ96T58 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.1■□□□□ 0.33
SPENQ96T58 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.1■□□□□ 0.33
SPENQ96T58 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SPENQ96T58 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.1■□□□□ 0.33
SPENQ96T58 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.1■□□□□ 0.33
SPENQ96T58 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.1■□□□□ 0.33
SPENQ96T58 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 AKR1C7P-201ENST00000305623 895 ntBASIC17.09■□□□□ 0.33
SPENQ96T58 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.09■□□□□ 0.33
SPENQ96T58 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SPENQ96T58 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
SPENQ96T58 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.09■□□□□ 0.33
SPENQ96T58 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.09■□□□□ 0.33
SPENQ96T58 REXO1L6P-202ENST00000619970 1078 ntBASIC17.09■□□□□ 0.33
SPENQ96T58 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SPENQ96T58 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.09■□□□□ 0.33
SPENQ96T58 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SPENQ96T58 TSPY22P-201ENST00000427496 604 ntBASIC17.09■□□□□ 0.33
SPENQ96T58 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.09■□□□□ 0.33
SPENQ96T58 AP000867.3-201ENST00000524675 377 ntBASIC17.09■□□□□ 0.33
SPENQ96T58 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.09■□□□□ 0.33
SPENQ96T58 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPENQ96T58 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPENQ96T58 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.09■□□□□ 0.33
SPENQ96T58 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPENQ96T58 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPENQ96T58 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SPENQ96T58 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPENQ96T58 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.08■□□□□ 0.33
SPENQ96T58 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SPENQ96T58 NUS1P1-201ENST00000446295 882 ntBASIC17.08■□□□□ 0.33
SPENQ96T58 SAPCD2P3-201ENST00000455031 850 ntBASIC17.08■□□□□ 0.33
SPENQ96T58 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.08■□□□□ 0.33
SPENQ96T58 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPENQ96T58 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.08■□□□□ 0.32
SPENQ96T58 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SPENQ96T58 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 AL662844.1-201ENST00000546340 181 ntBASIC17.08■□□□□ 0.32
SPENQ96T58 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SPENQ96T58 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.08■□□□□ 0.32
SPENQ96T58 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.08■□□□□ 0.32
SPENQ96T58 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPENQ96T58 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.08■□□□□ 0.32
SPENQ96T58 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SPENQ96T58 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.08■□□□□ 0.32
SPENQ96T58 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPENQ96T58 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SPENQ96T58 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms