Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNTNAP3BQ96NU0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 KRT8P20-201ENST00000423953 1409 ntBASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNTNAP3BQ96NU0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 SCARNA2-201ENST00000458748 420 ntBASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 AL049840.3-201ENST00000602669 611 ntBASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 AL356488.2-201ENST00000602755 427 ntBASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNTNAP3BQ96NU0 AC005229.4-201ENST00000610085 2198 ntBASIC18.08■□□□□ 0.49
CNTNAP3BQ96NU0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNTNAP3BQ96NU0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNTNAP3BQ96NU0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CNTNAP3BQ96NU0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNTNAP3BQ96NU0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNTNAP3BQ96NU0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.08■□□□□ 0.49
CNTNAP3BQ96NU0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.08■□□□□ 0.49
CNTNAP3BQ96NU0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 YBX2P1-201ENST00000394192 760 ntBASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 PAWRP1-201ENST00000451083 565 ntBASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNTNAP3BQ96NU0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms