Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19■□□□□ 0.63
SIPA1Q96FS4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
SIPA1Q96FS4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIPA1Q96FS4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19■□□□□ 0.63
SIPA1Q96FS4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19■□□□□ 0.63
SIPA1Q96FS4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIPA1Q96FS4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIPA1Q96FS4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19■□□□□ 0.63
SIPA1Q96FS4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SIPA1Q96FS4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIPA1Q96FS4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 AC036111.1-201ENST00000533973 1582 ntBASIC18.99■□□□□ 0.63
SIPA1Q96FS4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 KRT18P48-201ENST00000434763 852 ntBASIC18.99■□□□□ 0.63
SIPA1Q96FS4 MCCD1P1-208ENST00000445732 328 ntBASIC18.99■□□□□ 0.63
SIPA1Q96FS4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.99■□□□□ 0.63
SIPA1Q96FS4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.99■□□□□ 0.63
SIPA1Q96FS4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIPA1Q96FS4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 HCG4P8-203ENST00000443049 980 ntBASIC18.98■□□□□ 0.63
SIPA1Q96FS4 RASA4DP-201ENST00000460726 1199 ntBASIC18.98■□□□□ 0.63
SIPA1Q96FS4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 AC024243.1-201ENST00000609234 778 ntBASIC18.98■□□□□ 0.63
SIPA1Q96FS4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIPA1Q96FS4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 KRT126P-201ENST00000549467 1181 ntBASIC18.97■□□□□ 0.63
SIPA1Q96FS4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 MIR3180-5-201ENST00000583743 153 ntBASIC18.97■□□□□ 0.63
SIPA1Q96FS4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 KRT8P3-201ENST00000519669 1449 ntBASIC18.97■□□□□ 0.63
SIPA1Q96FS4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.97■□□□□ 0.63
SIPA1Q96FS4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms