Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 KRT8P7-201ENST00000533003 1432 ntBASIC23.24■■□□□ 1.31
CNKSR1Q969H4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC23.23■■□□□ 1.31
CNKSR1Q969H4 AC073314.1-201ENST00000568729 2216 ntBASIC23.23■■□□□ 1.31
CNKSR1Q969H4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 AL162377.1-201ENST00000618844 1793 ntBASIC23.22■■□□□ 1.31
CNKSR1Q969H4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CNKSR1Q969H4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 AP003733.1-201ENST00000491725 852 ntBASIC23.21■■□□□ 1.31
CNKSR1Q969H4 PENK-208ENST00000523051 772 ntTSL 5 BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 AL390719.2-201ENST00000606993 987 ntBASIC23.21■■□□□ 1.31
CNKSR1Q969H4 BX640515.1-201ENST00000617215 977 ntBASIC23.21■■□□□ 1.31
CNKSR1Q969H4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 AC233702.3-201ENST00000578656 1387 ntBASIC23.21■■□□□ 1.31
CNKSR1Q969H4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CNKSR1Q969H4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 LINC00565-201ENST00000562710 2331 ntBASIC23.2■■□□□ 1.3
CNKSR1Q969H4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 HLA-A-201ENST00000376802 1334 ntBASIC23.2■■□□□ 1.3
CNKSR1Q969H4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 KRT18P23-201ENST00000435622 1283 ntBASIC23.2■■□□□ 1.3
CNKSR1Q969H4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 AC104390.1-201ENST00000555663 520 ntBASIC23.2■■□□□ 1.3
CNKSR1Q969H4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 Z69720.1-201ENST00000601483 472 ntBASIC23.2■■□□□ 1.3
CNKSR1Q969H4 AC010240.3-201ENST00000607688 395 ntBASIC23.2■■□□□ 1.3
CNKSR1Q969H4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CNKSR1Q969H4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 LINC00167-201ENST00000530583 1419 ntBASIC23.19■■□□□ 1.3
CNKSR1Q969H4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 AC099336.1-202ENST00000602961 463 ntBASIC23.19■■□□□ 1.3
CNKSR1Q969H4 AC120114.3-201ENST00000611923 658 ntBASIC23.19■■□□□ 1.3
CNKSR1Q969H4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CNKSR1Q969H4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CNKSR1Q969H4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CNKSR1Q969H4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms