Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
USP9XQ93008 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP9XQ93008 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.52■□□□□ 0.24
USP9XQ93008 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP9XQ93008 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP9XQ93008 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
USP9XQ93008 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP9XQ93008 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.52■□□□□ 0.24
USP9XQ93008 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
USP9XQ93008 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP9XQ93008 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP9XQ93008 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP9XQ93008 AP001271.2-201ENST00000624018 1556 ntBASIC16.52■□□□□ 0.23
USP9XQ93008 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP9XQ93008 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.52■□□□□ 0.23
USP9XQ93008 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP9XQ93008 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.52■□□□□ 0.23
USP9XQ93008 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.52■□□□□ 0.23
USP9XQ93008 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
USP9XQ93008 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP9XQ93008 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
USP9XQ93008 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP9XQ93008 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
USP9XQ93008 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
USP9XQ93008 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.52■□□□□ 0.23
USP9XQ93008 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.51■□□□□ 0.23
USP9XQ93008 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 UPF3AP3-201ENST00000420996 769 ntBASIC16.51■□□□□ 0.23
USP9XQ93008 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.51■□□□□ 0.23
USP9XQ93008 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.51■□□□□ 0.23
USP9XQ93008 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.51■□□□□ 0.23
USP9XQ93008 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
USP9XQ93008 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC16.51■□□□□ 0.23
USP9XQ93008 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
USP9XQ93008 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.51■□□□□ 0.23
USP9XQ93008 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.51■□□□□ 0.23
USP9XQ93008 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 AL023284.2-201ENST00000405850 579 ntBASIC16.51■□□□□ 0.23
USP9XQ93008 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.51■□□□□ 0.23
USP9XQ93008 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.51■□□□□ 0.23
USP9XQ93008 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
USP9XQ93008 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.51■□□□□ 0.23
USP9XQ93008 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.51■□□□□ 0.23
USP9XQ93008 AC005332.3-201ENST00000589904 676 ntBASIC16.51■□□□□ 0.23
USP9XQ93008 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.51■□□□□ 0.23
USP9XQ93008 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.51■□□□□ 0.23
USP9XQ93008 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP9XQ93008 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.5■□□□□ 0.23
USP9XQ93008 AC245100.3-201ENST00000441281 285 ntBASIC16.5■□□□□ 0.23
USP9XQ93008 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.5■□□□□ 0.23
USP9XQ93008 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.5■□□□□ 0.23
USP9XQ93008 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.5■□□□□ 0.23
USP9XQ93008 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.5■□□□□ 0.23
USP9XQ93008 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.5■□□□□ 0.23
USP9XQ93008 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.5■□□□□ 0.23
USP9XQ93008 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.5■□□□□ 0.23
USP9XQ93008 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.5■□□□□ 0.23
USP9XQ93008 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.5■□□□□ 0.23
USP9XQ93008 AL049840.3-201ENST00000602669 611 ntBASIC16.5■□□□□ 0.23
USP9XQ93008 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP9XQ93008 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.5■□□□□ 0.23
USP9XQ93008 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.5■□□□□ 0.23
USP9XQ93008 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP9XQ93008 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP9XQ93008 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.49■□□□□ 0.23
USP9XQ93008 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.49■□□□□ 0.23
USP9XQ93008 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP9XQ93008 AC093909.1-201ENST00000504731 1122 ntBASIC16.49■□□□□ 0.23
USP9XQ93008 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.49■□□□□ 0.23
USP9XQ93008 AC092364.2-202ENST00000597012 1073 ntBASIC16.49■□□□□ 0.23
USP9XQ93008 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP9XQ93008 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms