Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX33Q8WV41 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.11■□□□□ 0.33
SNX33Q8WV41 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.11■□□□□ 0.33
SNX33Q8WV41 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SNX33Q8WV41 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.11■□□□□ 0.33
SNX33Q8WV41 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.11■□□□□ 0.33
SNX33Q8WV41 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SNX33Q8WV41 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNX33Q8WV41 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 POM121L13P-201ENST00000422362 380 ntBASIC17.1■□□□□ 0.33
SNX33Q8WV41 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.1■□□□□ 0.33
SNX33Q8WV41 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNX33Q8WV41 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX33Q8WV41 AC128676.1-201ENST00000454392 318 ntBASIC17.09■□□□□ 0.33
SNX33Q8WV41 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNX33Q8WV41 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX33Q8WV41 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX33Q8WV41 IRX1P1-201ENST00000438849 1838 ntBASIC17.09■□□□□ 0.33
SNX33Q8WV41 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 AC009113.1-201ENST00000570267 2443 ntBASIC17.09■□□□□ 0.33
SNX33Q8WV41 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX33Q8WV41 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX33Q8WV41 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX33Q8WV41 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNX33Q8WV41 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SNX33Q8WV41 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX33Q8WV41 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX33Q8WV41 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX33Q8WV41 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX33Q8WV41 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SNX33Q8WV41 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SNX33Q8WV41 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.08■□□□□ 0.33
SNX33Q8WV41 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.08■□□□□ 0.33
SNX33Q8WV41 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.08■□□□□ 0.33
SNX33Q8WV41 Z98044.1-201ENST00000632503 1764 ntBASIC17.08■□□□□ 0.33
SNX33Q8WV41 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX33Q8WV41 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX33Q8WV41 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX33Q8WV41 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SNX33Q8WV41 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SNX33Q8WV41 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SNX33Q8WV41 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.08■□□□□ 0.32
SNX33Q8WV41 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.08■□□□□ 0.32
SNX33Q8WV41 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
SNX33Q8WV41 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.08■□□□□ 0.32
SNX33Q8WV41 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.08■□□□□ 0.32
SNX33Q8WV41 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms