Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.76■□□□□ 0.75
CCHCR1Q8TD31 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCHCR1Q8TD31 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 KRT18P16-201ENST00000510337 1294 ntBASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.75■□□□□ 0.75
CCHCR1Q8TD31 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 C1QBPP2-201ENST00000528754 825 ntBASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCHCR1Q8TD31 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 AC090164.3-201ENST00000610780 2143 ntBASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 AC020763.4-201ENST00000623414 4170 ntBASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 AC239809.2-201ENST00000415381 517 ntBASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 TUBB8P6-201ENST00000436895 1288 ntBASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 AL023875.1-201ENST00000640777 796 ntBASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 AL512353.2-201ENST00000448759 1962 ntBASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCHCR1Q8TD31 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 WIZP1-201ENST00000531444 2299 ntBASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 PRORSD1P-201ENST00000295112 541 ntBASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCHCR1Q8TD31 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms