Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.48■■□□□ 1.19
NKX2-3Q8TAU0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.48■■□□□ 1.19
NKX2-3Q8TAU0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NKX2-3Q8TAU0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NKX2-3Q8TAU0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
NKX2-3Q8TAU0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
NKX2-3Q8TAU0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NKX2-3Q8TAU0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NKX2-3Q8TAU0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 HMGA1P5-201ENST00000412453 271 ntBASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 FAM87A-204ENST00000613235 858 ntBASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NKX2-3Q8TAU0 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 AC092647.4-201ENST00000457211 535 ntBASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 MIR4674-201ENST00000582457 87 ntBASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 AL691432.3-201ENST00000621860 400 ntBASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
NKX2-3Q8TAU0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
NKX2-3Q8TAU0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.45■■□□□ 1.19
NKX2-3Q8TAU0 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.45■■□□□ 1.19
NKX2-3Q8TAU0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 PCED1CP-201ENST00000419887 785 ntBASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 AL121956.5-201ENST00000625261 221 ntBASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
NKX2-3Q8TAU0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 TSPY5P-201ENST00000426936 936 ntBASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.44■■□□□ 1.18
NKX2-3Q8TAU0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 FEM1AP3-201ENST00000403722 1741 ntBASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 TSPY21P-201ENST00000433481 731 ntBASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 AC139887.4-201ENST00000607877 719 ntBASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.43■■□□□ 1.18
NKX2-3Q8TAU0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NKX2-3Q8TAU0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms