Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 Z85996.1-201ENST00000494644 937 ntBASIC21.46■■□□□ 1.03
RETREG2Q8NC44 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.46■■□□□ 1.03
RETREG2Q8NC44 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RETREG2Q8NC44 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
RETREG2Q8NC44 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 TSPY17P-201ENST00000450329 467 ntBASIC21.45■■□□□ 1.02
RETREG2Q8NC44 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 AL512604.3-201ENST00000569583 964 ntBASIC21.45■■□□□ 1.02
RETREG2Q8NC44 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 MYC-208ENST00000641036 567 ntBASIC21.45■■□□□ 1.02
RETREG2Q8NC44 AL032819.2-201ENST00000624543 2162 ntBASIC21.45■■□□□ 1.02
RETREG2Q8NC44 AIRN-201ENST00000601203 4374 ntBASIC21.45■■□□□ 1.02
RETREG2Q8NC44 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
RETREG2Q8NC44 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 AC141257.4-201ENST00000634557 245 ntBASIC21.44■■□□□ 1.02
RETREG2Q8NC44 AC136944.6-201ENST00000634818 245 ntBASIC21.44■■□□□ 1.02
RETREG2Q8NC44 AL031432.5-201ENST00000641059 760 ntBASIC21.44■■□□□ 1.02
RETREG2Q8NC44 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.44■■□□□ 1.02
RETREG2Q8NC44 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 AP000550.4-202ENST00000639755 178 ntBASIC21.43■■□□□ 1.02
RETREG2Q8NC44 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms