Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 AC090164.3-201ENST00000610780 2143 ntBASIC16.49■□□□□ 0.23
C11orf88Q6PI97 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
C11orf88Q6PI97 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
C11orf88Q6PI97 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 TSPY20P-201ENST00000450910 630 ntBASIC16.47■□□□□ 0.23
C11orf88Q6PI97 CDV3P1-201ENST00000471403 739 ntBASIC16.47■□□□□ 0.23
C11orf88Q6PI97 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 RARRES2P4-201ENST00000514074 484 ntBASIC16.47■□□□□ 0.23
C11orf88Q6PI97 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.47■□□□□ 0.23
C11orf88Q6PI97 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms