Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
H3F3CQ6NXT2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 AC087289.5-201ENST00000586076 3175 ntBASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 NEK4P2-201ENST00000580004 1012 ntBASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.52■□□□□ 0.4
H3F3CQ6NXT2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
H3F3CQ6NXT2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 AC008622.2-201ENST00000617006 1229 ntBASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 MYC-208ENST00000641036 567 ntBASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
H3F3CQ6NXT2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 AP000523.1-201ENST00000398242 1049 ntBASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 MIR4674-201ENST00000582457 87 ntBASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 AC140113.3-201ENST00000605663 199 ntBASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
H3F3CQ6NXT2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms