Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 AL158047.1-201ENST00000445918 881 ntBASIC17.41■□□□□ 0.38
ZNF544Q6NX49 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 LINC01465-201ENST00000408887 1940 ntBASIC17.41■□□□□ 0.38
ZNF544Q6NX49 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF544Q6NX49 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 AL390719.1-204ENST00000412397 1219 ntBASIC17.4■□□□□ 0.38
ZNF544Q6NX49 POM121L13P-201ENST00000422362 380 ntBASIC17.4■□□□□ 0.38
ZNF544Q6NX49 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
ZNF544Q6NX49 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.39■□□□□ 0.38
ZNF544Q6NX49 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF544Q6NX49 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.39■□□□□ 0.37
ZNF544Q6NX49 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 AC005829.2-201ENST00000571422 1056 ntBASIC17.39■□□□□ 0.37
ZNF544Q6NX49 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.39■□□□□ 0.37
ZNF544Q6NX49 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF544Q6NX49 UBE2SP1-201ENST00000450587 669 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms