Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PPP4R3AQ6IN85 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 KRT8P3-201ENST00000519669 1449 ntBASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 KRT8P9-201ENST00000558927 1449 ntBASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PPP4R3AQ6IN85 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 SLC25A1P2-201ENST00000430693 912 ntBASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.53■■□□□ 1.04
PPP4R3AQ6IN85 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 CYP2D8P-201ENST00000433633 1490 ntBASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 AL049812.1-201ENST00000432563 2267 ntBASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 TSPY14P-201ENST00000303979 915 ntBASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 AL023803.3-201ENST00000615559 522 ntBASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 AC073912.3-201ENST00000624414 853 ntBASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PPP4R3AQ6IN85 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.03
PPP4R3AQ6IN85 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PPP4R3AQ6IN85 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PPP4R3AQ6IN85 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.52■■□□□ 1.03
PPP4R3AQ6IN85 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
PPP4R3AQ6IN85 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 AC010947.1-201ENST00000623454 693 ntBASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PPP4R3AQ6IN85 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms