Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RAB6CQ53S08 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB6CQ53S08 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
RAB6CQ53S08 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB6CQ53S08 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB6CQ53S08 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.72■□□□□ 0.75
RAB6CQ53S08 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB6CQ53S08 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB6CQ53S08 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 DGCR10-201ENST00000609839 495 ntBASIC19.72■□□□□ 0.75
RAB6CQ53S08 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAB6CQ53S08 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB6CQ53S08 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAB6CQ53S08 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RAB6CQ53S08 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RAB6CQ53S08 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 MIR1238-201ENST00000408483 83 ntBASIC19.71■□□□□ 0.75
RAB6CQ53S08 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB6CQ53S08 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB6CQ53S08 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.71■□□□□ 0.75
RAB6CQ53S08 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.71■□□□□ 0.75
RAB6CQ53S08 AL512353.2-201ENST00000448759 1962 ntBASIC19.71■□□□□ 0.75
RAB6CQ53S08 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB6CQ53S08 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 AC120498.9-201ENST00000339021 3867 ntBASIC19.71■□□□□ 0.75
RAB6CQ53S08 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB6CQ53S08 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB6CQ53S08 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RAB6CQ53S08 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB6CQ53S08 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB6CQ53S08 UNC93B2-201ENST00000285383 730 ntBASIC19.7■□□□□ 0.74
RAB6CQ53S08 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 INGX-201ENST00000359239 846 ntBASIC19.7■□□□□ 0.74
RAB6CQ53S08 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB6CQ53S08 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB6CQ53S08 CYP2D8P-201ENST00000433633 1490 ntBASIC19.7■□□□□ 0.74
RAB6CQ53S08 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB6CQ53S08 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.7■□□□□ 0.74
RAB6CQ53S08 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB6CQ53S08 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RAB6CQ53S08 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB6CQ53S08 RNF165-205ENST00000588679 2904 ntBASIC19.69■□□□□ 0.74
RAB6CQ53S08 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.69■□□□□ 0.74
RAB6CQ53S08 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB6CQ53S08 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RAB6CQ53S08 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms