Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6AP1LQ52LC2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 POM121L13P-201ENST00000422362 380 ntBASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATP6AP1LQ52LC2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 AC135050.7-201ENST00000624508 2218 ntBASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6AP1LQ52LC2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 ANO7L1-203ENST00000602586 1720 ntBASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP6AP1LQ52LC2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ATP6AP1LQ52LC2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms