Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 AC120498.9-201ENST00000339021 3867 ntBASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPN20Q4JDL3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 AL596275.1-201ENST00000423464 877 ntBASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.96■□□□□ 0.79
PTPN20Q4JDL3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.95■□□□□ 0.79
PTPN20Q4JDL3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 AL020996.1-203ENST00000536896 2307 ntBASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 UNC93B2-201ENST00000285383 730 ntBASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 CRYGFP-201ENST00000418459 633 ntBASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 AP000525.1-201ENST00000608286 694 ntBASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PTPN20Q4JDL3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 AP005242.2-201ENST00000580065 1175 ntBASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 AC093525.10-201ENST00000625130 1569 ntBASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 AL512353.2-201ENST00000448759 1962 ntBASIC19.94■□□□□ 0.78
PTPN20Q4JDL3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN20Q4JDL3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms