Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS2P54278 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS2P54278 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.58■□□□□ 0.72
PMS2P54278 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS2P54278 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PMS2P54278 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.58■□□□□ 0.72
PMS2P54278 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PMS2P54278 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PMS2P54278 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 ABALON-201ENST00000629058 1903 ntBASIC19.57■□□□□ 0.72
PMS2P54278 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.57■□□□□ 0.72
PMS2P54278 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PMS2P54278 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PMS2P54278 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.57■□□□□ 0.72
PMS2P54278 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.57■□□□□ 0.72
PMS2P54278 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.57■□□□□ 0.72
PMS2P54278 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.57■□□□□ 0.72
PMS2P54278 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PMS2P54278 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PMS2P54278 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.56■□□□□ 0.72
PMS2P54278 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.56■□□□□ 0.72
PMS2P54278 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.56■□□□□ 0.72
PMS2P54278 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
PMS2P54278 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PMS2P54278 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PMS2P54278 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.56■□□□□ 0.72
PMS2P54278 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.56■□□□□ 0.72
PMS2P54278 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
PMS2P54278 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.55■□□□□ 0.72
PMS2P54278 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
PMS2P54278 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PMS2P54278 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PMS2P54278 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS2P54278 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.55■□□□□ 0.72
PMS2P54278 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS2P54278 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.55■□□□□ 0.72
PMS2P54278 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.55■□□□□ 0.72
PMS2P54278 AC083906.6-201ENST00000641366 219 ntBASIC19.55■□□□□ 0.72
PMS2P54278 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PMS2P54278 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PMS2P54278 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms