Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.88■□□□□ 0.93
PMS1P54277 AC091390.4-202ENST00000476426 537 ntBASIC20.88■□□□□ 0.93
PMS1P54277 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.88■□□□□ 0.93
PMS1P54277 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.88■□□□□ 0.93
PMS1P54277 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.88■□□□□ 0.93
PMS1P54277 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PMS1P54277 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.88■□□□□ 0.93
PMS1P54277 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PMS1P54277 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PMS1P54277 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
PMS1P54277 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.87■□□□□ 0.93
PMS1P54277 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.87■□□□□ 0.93
PMS1P54277 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PMS1P54277 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.87■□□□□ 0.93
PMS1P54277 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.87■□□□□ 0.93
PMS1P54277 AL359736.2-201ENST00000621992 437 ntBASIC20.87■□□□□ 0.93
PMS1P54277 RCC2P6-201ENST00000526625 1557 ntBASIC20.87■□□□□ 0.93
PMS1P54277 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PMS1P54277 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.87■□□□□ 0.93
PMS1P54277 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.87■□□□□ 0.93
PMS1P54277 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
PMS1P54277 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.87■□□□□ 0.93
PMS1P54277 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PMS1P54277 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PMS1P54277 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.86■□□□□ 0.93
PMS1P54277 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PMS1P54277 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
PMS1P54277 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 AP002982.1-201ENST00000492365 877 ntBASIC20.86■□□□□ 0.93
PMS1P54277 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.86■□□□□ 0.93
PMS1P54277 AC131212.4-201ENST00000623606 975 ntBASIC20.86■□□□□ 0.93
PMS1P54277 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PMS1P54277 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.86■□□□□ 0.93
PMS1P54277 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 AC090164.3-201ENST00000610780 2143 ntBASIC20.86■□□□□ 0.93
PMS1P54277 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PMS1P54277 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.85■□□□□ 0.93
PMS1P54277 KSR1P1-201ENST00000446298 240 ntBASIC20.85■□□□□ 0.93
PMS1P54277 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
PMS1P54277 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.85■□□□□ 0.93
PMS1P54277 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PMS1P54277 AF186192.3-201ENST00000583427 947 ntBASIC20.85■□□□□ 0.93
PMS1P54277 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.85■□□□□ 0.93
PMS1P54277 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.85■□□□□ 0.93
PMS1P54277 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.85■□□□□ 0.93
PMS1P54277 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
PMS1P54277 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.85■□□□□ 0.93
PMS1P54277 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PMS1P54277 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PMS1P54277 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PMS1P54277 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS1P54277 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PMS1P54277 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PMS1P54277 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS1P54277 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PMS1P54277 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms