Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
LIMK2P53671 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LIMK2P53671 FEM1AP3-201ENST00000403722 1741 ntBASIC19.14■□□□□ 0.65
LIMK2P53671 Z98044.1-201ENST00000632503 1764 ntBASIC19.14■□□□□ 0.65
LIMK2P53671 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
LIMK2P53671 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LIMK2P53671 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 AC087499.1-201ENST00000418141 1075 ntBASIC19.13■□□□□ 0.65
LIMK2P53671 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.13■□□□□ 0.65
LIMK2P53671 AL355355.2-201ENST00000442321 338 ntBASIC19.13■□□□□ 0.65
LIMK2P53671 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 AP003071.4-201ENST00000562276 1284 ntBASIC19.13■□□□□ 0.65
LIMK2P53671 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.13■□□□□ 0.65
LIMK2P53671 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.13■□□□□ 0.65
LIMK2P53671 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.13■□□□□ 0.65
LIMK2P53671 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LIMK2P53671 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LIMK2P53671 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.12■□□□□ 0.65
LIMK2P53671 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.12■□□□□ 0.65
LIMK2P53671 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.12■□□□□ 0.65
LIMK2P53671 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LIMK2P53671 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.12■□□□□ 0.65
LIMK2P53671 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LIMK2P53671 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.12■□□□□ 0.65
LIMK2P53671 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LIMK2P53671 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 FAM210CP-201ENST00000445714 574 ntBASIC19.12■□□□□ 0.65
LIMK2P53671 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.12■□□□□ 0.65
LIMK2P53671 AC073195.1-201ENST00000607241 877 ntBASIC19.12■□□□□ 0.65
LIMK2P53671 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.12■□□□□ 0.65
LIMK2P53671 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.12■□□□□ 0.65
LIMK2P53671 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LIMK2P53671 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.12■□□□□ 0.65
LIMK2P53671 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.11■□□□□ 0.65
LIMK2P53671 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LIMK2P53671 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
LIMK2P53671 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LIMK2P53671 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.11■□□□□ 0.65
LIMK2P53671 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.11■□□□□ 0.65
LIMK2P53671 AC133561.5-201ENST00000635547 218 ntBASIC19.11■□□□□ 0.65
LIMK2P53671 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LIMK2P53671 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.11■□□□□ 0.65
LIMK2P53671 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
LIMK2P53671 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.11■□□□□ 0.65
LIMK2P53671 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LIMK2P53671 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.11■□□□□ 0.65
LIMK2P53671 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.11■□□□□ 0.65
LIMK2P53671 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 AL512353.2-201ENST00000448759 1962 ntBASIC19.1■□□□□ 0.65
LIMK2P53671 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms