Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUBP1P53384 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NUBP1P53384 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NUBP1P53384 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.89■□□□□ 0.61
NUBP1P53384 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.88■□□□□ 0.61
NUBP1P53384 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.88■□□□□ 0.61
NUBP1P53384 GPX1P2-201ENST00000429271 606 ntBASIC18.88■□□□□ 0.61
NUBP1P53384 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.88■□□□□ 0.61
NUBP1P53384 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.88■□□□□ 0.61
NUBP1P53384 SCARNA2-201ENST00000458748 420 ntBASIC18.88■□□□□ 0.61
NUBP1P53384 RN7SL606P-201ENST00000472779 293 ntBASIC18.88■□□□□ 0.61
NUBP1P53384 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.88■□□□□ 0.61
NUBP1P53384 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.88■□□□□ 0.61
NUBP1P53384 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.88■□□□□ 0.61
NUBP1P53384 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.88■□□□□ 0.61
NUBP1P53384 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.88■□□□□ 0.61
NUBP1P53384 AL592071.1-201ENST00000611956 408 ntBASIC18.88■□□□□ 0.61
NUBP1P53384 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NUBP1P53384 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.88■□□□□ 0.61
NUBP1P53384 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NUBP1P53384 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.88■□□□□ 0.61
NUBP1P53384 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.88■□□□□ 0.61
NUBP1P53384 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.88■□□□□ 0.61
NUBP1P53384 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NUBP1P53384 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.87■□□□□ 0.61
NUBP1P53384 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NUBP1P53384 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC18.87■□□□□ 0.61
NUBP1P53384 KRT18P23-201ENST00000435622 1283 ntBASIC18.87■□□□□ 0.61
NUBP1P53384 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.87■□□□□ 0.61
NUBP1P53384 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.87■□□□□ 0.61
NUBP1P53384 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.87■□□□□ 0.61
NUBP1P53384 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 AC148477.8-201ENST00000624298 468 ntBASIC18.87■□□□□ 0.61
NUBP1P53384 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.87■□□□□ 0.61
NUBP1P53384 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NUBP1P53384 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUBP1P53384 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.86■□□□□ 0.61
NUBP1P53384 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.86■□□□□ 0.61
NUBP1P53384 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.86■□□□□ 0.61
NUBP1P53384 AP000568.1-201ENST00000282964 442 ntBASIC18.86■□□□□ 0.61
NUBP1P53384 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.86■□□□□ 0.61
NUBP1P53384 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.86■□□□□ 0.61
NUBP1P53384 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.86■□□□□ 0.61
NUBP1P53384 RPS6P14-201ENST00000425165 719 ntBASIC18.86■□□□□ 0.61
NUBP1P53384 AC244107.1-201ENST00000442033 332 ntBASIC18.86■□□□□ 0.61
NUBP1P53384 AC004967.1-201ENST00000453589 447 ntBASIC18.86■□□□□ 0.61
NUBP1P53384 MINOS1P3-201ENST00000457048 203 ntBASIC18.86■□□□□ 0.61
NUBP1P53384 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.86■□□□□ 0.61
NUBP1P53384 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.86■□□□□ 0.61
NUBP1P53384 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC18.86■□□□□ 0.61
NUBP1P53384 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.86■□□□□ 0.61
NUBP1P53384 KLK13-207ENST00000596955 737 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 AL591684.3-201ENST00000605187 298 ntBASIC18.86■□□□□ 0.61
NUBP1P53384 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.86■□□□□ 0.61
NUBP1P53384 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NUBP1P53384 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NUBP1P53384 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NUBP1P53384 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NUBP1P53384 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 AC092720.2-201ENST00000602388 1665 ntBASIC18.85■□□□□ 0.61
NUBP1P53384 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.85■□□□□ 0.61
NUBP1P53384 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.85■□□□□ 0.61
NUBP1P53384 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NUBP1P53384 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.85■□□□□ 0.61
NUBP1P53384 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NUBP1P53384 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms