Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKBP51801 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKBP51801 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCNKBP51801 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLCNKBP51801 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.27■□□□□ 0.83
CLCNKBP51801 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.27■□□□□ 0.83
CLCNKBP51801 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCNKBP51801 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKBP51801 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKBP51801 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKBP51801 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKBP51801 IRX1P1-201ENST00000438849 1838 ntBASIC20.26■□□□□ 0.83
CLCNKBP51801 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCNKBP51801 MCCD1P1-208ENST00000445732 328 ntBASIC20.26■□□□□ 0.83
CLCNKBP51801 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.26■□□□□ 0.83
CLCNKBP51801 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCNKBP51801 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.26■□□□□ 0.83
CLCNKBP51801 AL358472.4-201ENST00000633140 710 ntBASIC20.26■□□□□ 0.83
CLCNKBP51801 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKBP51801 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CLCNKBP51801 AC007952.6-201ENST00000573168 2673 ntBASIC20.26■□□□□ 0.83
CLCNKBP51801 AC003957.1-201ENST00000625108 2673 ntBASIC20.26■□□□□ 0.83
CLCNKBP51801 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCNKBP51801 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCNKBP51801 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLCNKBP51801 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCNKBP51801 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLCNKBP51801 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCNKBP51801 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLCNKBP51801 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLCNKBP51801 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCNKBP51801 FEM1AP3-201ENST00000403722 1741 ntBASIC20.25■□□□□ 0.83
CLCNKBP51801 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CLCNKBP51801 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCNKBP51801 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CLCNKBP51801 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCNKBP51801 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCNKBP51801 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCNKBP51801 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCNKBP51801 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 AC093484.2-201ENST00000580996 2166 ntBASIC20.25■□□□□ 0.83
CLCNKBP51801 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCNKBP51801 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCNKBP51801 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCNKBP51801 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CLCNKBP51801 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.24■□□□□ 0.83
CLCNKBP51801 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.24■□□□□ 0.83
CLCNKBP51801 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.24■□□□□ 0.83
CLCNKBP51801 AL671277.2-201ENST00000458060 996 ntBASIC20.24■□□□□ 0.83
CLCNKBP51801 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.24■□□□□ 0.83
CLCNKBP51801 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.24■□□□□ 0.83
CLCNKBP51801 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 AC141586.3-201ENST00000562166 1838 ntBASIC20.24■□□□□ 0.83
CLCNKBP51801 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLCNKBP51801 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLCNKBP51801 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLCNKBP51801 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKBP51801 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CLCNKBP51801 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKBP51801 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.23■□□□□ 0.83
CLCNKBP51801 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKBP51801 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.23■□□□□ 0.83
CLCNKBP51801 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLCNKBP51801 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKBP51801 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKBP51801 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKBP51801 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCNKBP51801 MIR3180-5-201ENST00000583743 153 ntBASIC20.23■□□□□ 0.83
CLCNKBP51801 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms