Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR4P51571 AC141586.3-201ENST00000562166 1838 ntBASIC17.41■□□□□ 0.38
SSR4P51571 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSR4P51571 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.41■□□□□ 0.38
SSR4P51571 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.41■□□□□ 0.38
SSR4P51571 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SSR4P51571 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SSR4P51571 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSR4P51571 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSR4P51571 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR4P51571 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.4■□□□□ 0.38
SSR4P51571 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR4P51571 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSR4P51571 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.4■□□□□ 0.38
SSR4P51571 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.4■□□□□ 0.38
SSR4P51571 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR4P51571 AC139887.4-201ENST00000607877 719 ntBASIC17.4■□□□□ 0.38
SSR4P51571 AC008622.2-201ENST00000617006 1229 ntBASIC17.4■□□□□ 0.38
SSR4P51571 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.4■□□□□ 0.38
SSR4P51571 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SSR4P51571 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SSR4P51571 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.4■□□□□ 0.38
SSR4P51571 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SSR4P51571 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSR4P51571 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSR4P51571 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR4P51571 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 FEM1AP3-201ENST00000403722 1741 ntBASIC17.39■□□□□ 0.37
SSR4P51571 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR4P51571 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SSR4P51571 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR4P51571 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.39■□□□□ 0.37
SSR4P51571 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.39■□□□□ 0.37
SSR4P51571 AP000523.1-201ENST00000398242 1049 ntBASIC17.39■□□□□ 0.37
SSR4P51571 AC117947.1-201ENST00000427448 529 ntBASIC17.39■□□□□ 0.37
SSR4P51571 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR4P51571 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.39■□□□□ 0.37
SSR4P51571 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.39■□□□□ 0.37
SSR4P51571 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR4P51571 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR4P51571 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.39■□□□□ 0.37
SSR4P51571 LINC01238-205ENST00000567549 1107 ntBASIC17.39■□□□□ 0.37
SSR4P51571 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 MIR4674-201ENST00000582457 87 ntBASIC17.39■□□□□ 0.37
SSR4P51571 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.39■□□□□ 0.37
SSR4P51571 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SSR4P51571 AL031432.5-201ENST00000641059 760 ntBASIC17.39■□□□□ 0.37
SSR4P51571 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.39■□□□□ 0.37
SSR4P51571 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSR4P51571 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SSR4P51571 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.39■□□□□ 0.37
SSR4P51571 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SSR4P51571 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SSR4P51571 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.38■□□□□ 0.37
SSR4P51571 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.38■□□□□ 0.37
SSR4P51571 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 IRX1P1-201ENST00000438849 1838 ntBASIC17.38■□□□□ 0.37
SSR4P51571 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.38■□□□□ 0.37
SSR4P51571 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 AC093484.2-201ENST00000580996 2166 ntBASIC17.38■□□□□ 0.37
SSR4P51571 AL032819.2-201ENST00000624543 2162 ntBASIC17.38■□□□□ 0.37
SSR4P51571 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.38■□□□□ 0.37
SSR4P51571 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SSR4P51571 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SSR4P51571 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.38■□□□□ 0.37
SSR4P51571 AC140113.3-201ENST00000605663 199 ntBASIC17.38■□□□□ 0.37
SSR4P51571 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
SSR4P51571 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
SSR4P51571 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.38■□□□□ 0.37
SSR4P51571 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SSR4P51571 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SSR4P51571 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSR4P51571 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms