Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK7P50613 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDK7P50613 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK7P50613 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK7P50613 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDK7P50613 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.95■□□□□ 0.94
CDK7P50613 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDK7P50613 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDK7P50613 MIR662-201ENST00000384847 95 ntBASIC20.95■□□□□ 0.94
CDK7P50613 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDK7P50613 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 EMBP1-201ENST00000458200 901 ntBASIC20.95■□□□□ 0.94
CDK7P50613 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 AC009078.2-202ENST00000463353 338 ntBASIC20.95■□□□□ 0.94
CDK7P50613 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK7P50613 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CDK7P50613 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK7P50613 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CDK7P50613 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK7P50613 IFNL4P1-201ENST00000607083 540 ntBASIC20.95■□□□□ 0.94
CDK7P50613 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK7P50613 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CDK7P50613 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDK7P50613 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CDK7P50613 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.95■□□□□ 0.94
CDK7P50613 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK7P50613 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK7P50613 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK7P50613 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CDK7P50613 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK7P50613 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.94■□□□□ 0.94
CDK7P50613 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK7P50613 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDK7P50613 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK7P50613 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDK7P50613 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK7P50613 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CDK7P50613 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.94■□□□□ 0.94
CDK7P50613 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK7P50613 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CDK7P50613 AC036111.1-201ENST00000533973 1582 ntBASIC20.93■□□□□ 0.94
CDK7P50613 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.93■□□□□ 0.94
CDK7P50613 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDK7P50613 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.93■□□□□ 0.94
CDK7P50613 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.93■□□□□ 0.94
CDK7P50613 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.93■□□□□ 0.94
CDK7P50613 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.93■□□□□ 0.94
CDK7P50613 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.93■□□□□ 0.94
CDK7P50613 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDK7P50613 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.93■□□□□ 0.94
CDK7P50613 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDK7P50613 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDK7P50613 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.93■□□□□ 0.94
CDK7P50613 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.93■□□□□ 0.94
CDK7P50613 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CDK7P50613 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK7P50613 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK7P50613 AL512408.1-201ENST00000569378 2000 ntBASIC20.92■□□□□ 0.94
CDK7P50613 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK7P50613 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK7P50613 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDK7P50613 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.92■□□□□ 0.94
CDK7P50613 DRAXINP1-201ENST00000437611 948 ntBASIC20.92■□□□□ 0.94
CDK7P50613 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.92■□□□□ 0.94
CDK7P50613 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.92■□□□□ 0.94
CDK7P50613 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK7P50613 AL031008.1-201ENST00000619963 541 ntBASIC20.92■□□□□ 0.94
CDK7P50613 AL157888.1-201ENST00000631930 593 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms