Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.82■□□□□ 0.28
SRP9P49458 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.82■□□□□ 0.28
SRP9P49458 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.82■□□□□ 0.28
SRP9P49458 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.82■□□□□ 0.28
SRP9P49458 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.82■□□□□ 0.28
SRP9P49458 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.82■□□□□ 0.28
SRP9P49458 AL121829.2-201ENST00000620908 328 ntBASIC16.82■□□□□ 0.28
SRP9P49458 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.82■□□□□ 0.28
SRP9P49458 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SRP9P49458 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.82■□□□□ 0.28
SRP9P49458 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SRP9P49458 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SRP9P49458 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.81■□□□□ 0.28
SRP9P49458 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.81■□□□□ 0.28
SRP9P49458 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 BICD1-207ENST00000551848 1962 ntBASIC16.81■□□□□ 0.28
SRP9P49458 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SRP9P49458 KRT18P29-201ENST00000397031 1267 ntBASIC16.81■□□□□ 0.28
SRP9P49458 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.81■□□□□ 0.28
SRP9P49458 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 AL354751.1-201ENST00000412768 1863 ntBASIC16.81■□□□□ 0.28
SRP9P49458 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.81■□□□□ 0.28
SRP9P49458 AC090340.1-201ENST00000620778 4980 ntBASIC16.81■□□□□ 0.28
SRP9P49458 AC012313.1-201ENST00000593393 3059 ntBASIC16.81■□□□□ 0.28
SRP9P49458 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.81■□□□□ 0.28
SRP9P49458 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SRP9P49458 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SRP9P49458 AP001271.2-201ENST00000624018 1556 ntBASIC16.81■□□□□ 0.28
SRP9P49458 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRP9P49458 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.8■□□□□ 0.28
SRP9P49458 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.8■□□□□ 0.28
SRP9P49458 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.8■□□□□ 0.28
SRP9P49458 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SRP9P49458 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.8■□□□□ 0.28
SRP9P49458 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.8■□□□□ 0.28
SRP9P49458 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SRP9P49458 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.8■□□□□ 0.28
SRP9P49458 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.8■□□□□ 0.28
SRP9P49458 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.8■□□□□ 0.28
SRP9P49458 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.8■□□□□ 0.28
SRP9P49458 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.8■□□□□ 0.28
SRP9P49458 AC069544.1-201ENST00000609399 999 ntBASIC16.8■□□□□ 0.28
SRP9P49458 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.8■□□□□ 0.28
SRP9P49458 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRP9P49458 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 AC116351.2-201ENST00000606540 1585 ntBASIC16.8■□□□□ 0.28
SRP9P49458 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRP9P49458 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRP9P49458 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.79■□□□□ 0.28
SRP9P49458 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SRP9P49458 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SRP9P49458 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SRP9P49458 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SRP9P49458 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SRP9P49458 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.79■□□□□ 0.28
SRP9P49458 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 ITM2C-210ENST00000620962 501 ntBASIC16.79■□□□□ 0.28
SRP9P49458 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.79■□□□□ 0.28
SRP9P49458 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.79■□□□□ 0.28
SRP9P49458 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms