Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KRT20P35900 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 PRORSD1P-201ENST00000295112 541 ntBASIC18.02■□□□□ 0.48
KRT20P35900 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT20P35900 KRT8P8-201ENST00000434750 1448 ntBASIC18.02■□□□□ 0.48
KRT20P35900 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.02■□□□□ 0.48
KRT20P35900 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT20P35900 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT20P35900 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT20P35900 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT20P35900 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT20P35900 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT20P35900 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT20P35900 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.02■□□□□ 0.47
KRT20P35900 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
KRT20P35900 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT20P35900 CROCCP3-202ENST00000420820 1947 ntBASIC18.02■□□□□ 0.47
KRT20P35900 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
KRT20P35900 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KRT20P35900 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
KRT20P35900 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
KRT20P35900 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KRT20P35900 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.01■□□□□ 0.47
KRT20P35900 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KRT20P35900 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.01■□□□□ 0.47
KRT20P35900 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
KRT20P35900 AL359736.2-201ENST00000621992 437 ntBASIC18.01■□□□□ 0.47
KRT20P35900 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT20P35900 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT20P35900 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
KRT20P35900 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT20P35900 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 AC005332.8-201ENST00000622750 2735 ntBASIC18■□□□□ 0.47
KRT20P35900 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
KRT20P35900 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
KRT20P35900 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 NME1-207ENST00000480143 964 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18■□□□□ 0.47
KRT20P35900 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18■□□□□ 0.47
KRT20P35900 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
KRT20P35900 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18■□□□□ 0.47
KRT20P35900 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT20P35900 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT20P35900 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
KRT20P35900 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT20P35900 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT20P35900 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT20P35900 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.99■□□□□ 0.47
KRT20P35900 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
KRT20P35900 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KRT20P35900 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
KRT20P35900 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT20P35900 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms