Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT9P35527 LETM1P2-201ENST00000597330 2178 ntBASIC20.76■□□□□ 0.91
KRT9P35527 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
KRT9P35527 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT9P35527 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT9P35527 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT9P35527 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT9P35527 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT9P35527 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT9P35527 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT9P35527 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT9P35527 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT9P35527 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT9P35527 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
KRT9P35527 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
KRT9P35527 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
KRT9P35527 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT9P35527 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KRT9P35527 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
KRT9P35527 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT9P35527 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
KRT9P35527 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT9P35527 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
KRT9P35527 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
KRT9P35527 BICD1-207ENST00000551848 1962 ntBASIC20.74■□□□□ 0.91
KRT9P35527 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT9P35527 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
KRT9P35527 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT9P35527 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT9P35527 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT9P35527 AC069544.1-201ENST00000609399 999 ntBASIC20.74■□□□□ 0.91
KRT9P35527 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT9P35527 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KRT9P35527 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT9P35527 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT9P35527 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT9P35527 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT9P35527 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT9P35527 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT9P35527 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT9P35527 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT9P35527 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT9P35527 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
KRT9P35527 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT9P35527 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KRT9P35527 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KRT9P35527 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
KRT9P35527 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.73■□□□□ 0.91
KRT9P35527 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KRT9P35527 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 TUBB8P6-201ENST00000436895 1288 ntBASIC20.73■□□□□ 0.91
KRT9P35527 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.73■□□□□ 0.91
KRT9P35527 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT9P35527 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
KRT9P35527 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
KRT9P35527 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 AC005332.8-201ENST00000622750 2735 ntBASIC20.73■□□□□ 0.91
KRT9P35527 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT9P35527 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
KRT9P35527 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
KRT9P35527 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT9P35527 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
KRT9P35527 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.72■□□□□ 0.91
KRT9P35527 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT9P35527 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT9P35527 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT9P35527 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT9P35527 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.72■□□□□ 0.91
KRT9P35527 MTDHP1-201ENST00000605323 784 ntBASIC20.72■□□□□ 0.91
KRT9P35527 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.72■□□□□ 0.91
KRT9P35527 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
KRT9P35527 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.72■□□□□ 0.91
KRT9P35527 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KRT9P35527 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
KRT9P35527 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms