Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RORAP35398 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
RORAP35398 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.02■□□□□ 0.48
RORAP35398 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.02■□□□□ 0.48
RORAP35398 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RORAP35398 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
RORAP35398 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.02■□□□□ 0.47
RORAP35398 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RORAP35398 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RORAP35398 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RORAP35398 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RORAP35398 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.01■□□□□ 0.47
RORAP35398 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.01■□□□□ 0.47
RORAP35398 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.01■□□□□ 0.47
RORAP35398 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 KRT8P45-201ENST00000414328 1447 ntBASIC18.01■□□□□ 0.47
RORAP35398 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 TSPY5P-201ENST00000426936 936 ntBASIC18.01■□□□□ 0.47
RORAP35398 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.01■□□□□ 0.47
RORAP35398 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.01■□□□□ 0.47
RORAP35398 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.01■□□□□ 0.47
RORAP35398 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.01■□□□□ 0.47
RORAP35398 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.01■□□□□ 0.47
RORAP35398 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 AC011558.1-201ENST00000623459 338 ntBASIC18.01■□□□□ 0.47
RORAP35398 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RORAP35398 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RORAP35398 MYC-208ENST00000641036 567 ntBASIC18.01■□□□□ 0.47
RORAP35398 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.01■□□□□ 0.47
RORAP35398 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
RORAP35398 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.01■□□□□ 0.47
RORAP35398 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RORAP35398 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.01■□□□□ 0.47
RORAP35398 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RORAP35398 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18■□□□□ 0.47
RORAP35398 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18■□□□□ 0.47
RORAP35398 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
RORAP35398 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18■□□□□ 0.47
RORAP35398 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18■□□□□ 0.47
RORAP35398 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RORAP35398 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
RORAP35398 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RORAP35398 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RORAP35398 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18■□□□□ 0.47
RORAP35398 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18■□□□□ 0.47
RORAP35398 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18■□□□□ 0.47
RORAP35398 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18■□□□□ 0.47
RORAP35398 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18■□□□□ 0.47
RORAP35398 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18■□□□□ 0.47
RORAP35398 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18■□□□□ 0.47
RORAP35398 AL031432.5-201ENST00000641059 760 ntBASIC18■□□□□ 0.47
RORAP35398 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
RORAP35398 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RORAP35398 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18■□□□□ 0.47
RORAP35398 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RORAP35398 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.99■□□□□ 0.47
RORAP35398 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RORAP35398 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
RORAP35398 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.99■□□□□ 0.47
RORAP35398 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.99■□□□□ 0.47
RORAP35398 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.99■□□□□ 0.47
RORAP35398 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.99■□□□□ 0.47
RORAP35398 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RORAP35398 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.98■□□□□ 0.47
RORAP35398 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RORAP35398 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
RORAP35398 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.98■□□□□ 0.47
RORAP35398 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
RORAP35398 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.98■□□□□ 0.47
RORAP35398 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RORAP35398 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms