Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 NUP98-205ENST00000397007 3698 ntTSL 1 (best) BASIC12.26□□□□□ -0.452e-7■■■■□ 22.1
U2AF2P26368 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC14.88□□□□□ -0.032e-7■■■■□ 22.1
U2AF2P26368 MFSD8-208ENST00000515130 3314 ntTSL 514.02□□□□□ -0.172e-7■■■■□ 22.1
U2AF2P26368 MFSD8-254ENST00000641882 1792 nt13.04□□□□□ -0.322e-7■■■■□ 22.1
U2AF2P26368 MFSD8-206ENST00000509826 1720 ntTSL 212.58□□□□□ -0.42e-7■■■■□ 22.1
U2AF2P26368 MFSD8-259ENST00000642042 2303 ntBASIC11.16□□□□□ -0.622e-7■■■■□ 22.1
U2AF2P26368 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC9.47□□□□□ -0.892e-7■■■■□ 22.1
U2AF2P26368 MFSD8-227ENST00000641393 4069 ntBASIC9□□□□□ -0.972e-7■■■■□ 22.1
U2AF2P26368 MFSD8-217ENST00000641178 4374 ntBASIC8.98□□□□□ -0.972e-7■■■■□ 22.1
U2AF2P26368 MFSD8-251ENST00000641843 1596 nt8.97□□□□□ -0.972e-7■■■■□ 22.1
U2AF2P26368 MFSD8-218ENST00000641186 4448 ntBASIC8.71□□□□□ -1.022e-7■■■■□ 22.1
U2AF2P26368 MFSD8-253ENST00000641870 2109 nt8.54□□□□□ -1.042e-7■■■■□ 22.1
U2AF2P26368 MFSD8-222ENST00000641332 2759 nt8.47□□□□□ -1.052e-7■■■■□ 22.1
U2AF2P26368 MFSD8-246ENST00000641748 3201 nt8.39□□□□□ -1.072e-7■■■■□ 22.1
U2AF2P26368 MFSD8-260ENST00000642078 1747 nt8.34□□□□□ -1.072e-7■■■■□ 22.1
U2AF2P26368 MFSD8-244ENST00000641742 1823 nt8.31□□□□□ -1.082e-7■■■■□ 22.1
U2AF2P26368 MFSD8-256ENST00000641949 1640 ntBASIC8.18□□□□□ -1.12e-7■■■■□ 22.1
U2AF2P26368 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.182e-7■■■■□ 22.1
U2AF2P26368 MFSD8-223ENST00000641340 2098 nt7.02□□□□□ -1.292e-7■■■■□ 22.1
U2AF2P26368 MFSD8-239ENST00000641590 2479 ntBASIC6.75□□□□□ -1.332e-7■■■■□ 22.1
U2AF2P26368 MFSD8-219ENST00000641228 2559 ntBASIC6.7□□□□□ -1.342e-7■■■■□ 22.1
U2AF2P26368 MFSD8-247ENST00000641753 3007 nt6.67□□□□□ -1.342e-7■■■■□ 22.1
U2AF2P26368 MFSD8-228ENST00000641397 3925 nt6.39□□□□□ -1.392e-7■■■■□ 22.1
U2AF2P26368 MFSD8-230ENST00000641434 3209 nt6.25□□□□□ -1.412e-7■■■■□ 22.1
U2AF2P26368 MFSD8-240ENST00000641658 1731 nt5.96□□□□□ -1.452e-7■■■■□ 22.1
U2AF2P26368 MFSD8-235ENST00000641508 4321 nt5.39□□□□□ -1.552e-7■■■■□ 22.1
U2AF2P26368 MFSD8-216ENST00000641147 4009 ntBASIC5.14□□□□□ -1.592e-7■■■■□ 22.1
U2AF2P26368 MFSD8-211ENST00000641092 4054 nt4.97□□□□□ -1.612e-7■■■■□ 22.1
U2AF2P26368 MFSD8-242ENST00000641690 4199 ntBASIC4.95□□□□□ -1.622e-7■■■■□ 22.1
U2AF2P26368 MFSD8-258ENST00000642034 4132 nt4.75□□□□□ -1.652e-7■■■■□ 22.1
U2AF2P26368 MFSD8-255ENST00000641928 4083 nt4.6□□□□□ -1.672e-7■■■■□ 22.1
U2AF2P26368 MFSD8-232ENST00000641464 4197 nt4.59□□□□□ -1.672e-7■■■■□ 22.1
U2AF2P26368 MFSD8-212ENST00000641133 5109 nt4.41□□□□□ -1.72e-7■■■■□ 22.1
U2AF2P26368 MFSD8-236ENST00000641509 4050 ntBASIC4.17□□□□□ -1.742e-7■■■■□ 22.1
U2AF2P26368 MFSD8-248ENST00000641774 4247 nt4.13□□□□□ -1.752e-7■■■■□ 22.1
U2AF2P26368 MFSD8-233ENST00000641482 4860 ntBASIC4.06□□□□□ -1.762e-7■■■■□ 22.1
U2AF2P26368 MFSD8-210ENST00000641025 4261 nt3.64□□□□□ -1.832e-7■■■■□ 22.1
U2AF2P26368 TIAL1-201ENST00000369086 490 ntTSL 22.6□□□□□ -1.991e-9■■■■□ 22.1
U2AF2P26368 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC14.75□□□□□ -0.056e-7■■■■□ 22
U2AF2P26368 OIP5-AS1-205ENST00000558945 1269 ntTSL 525.42■■□□□ 1.667e-9■■■■□ 22
U2AF2P26368 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.42■■□□□ 1.667e-9■■■■□ 22
U2AF2P26368 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.26■■□□□ 1.477e-9■■■■□ 22
U2AF2P26368 OIP5-AS1-210ENST00000561275 821 ntTSL 310.31□□□□□ -0.767e-9■■■■□ 22
U2AF2P26368 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC9.37□□□□□ -0.917e-9■■■■□ 22
U2AF2P26368 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.141e-6■■■■□ 22
U2AF2P26368 TRIO-218ENST00000512070 8907 ntTSL 215.9■□□□□ 0.141e-6■■■■□ 22
U2AF2P26368 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC14.35□□□□□ -0.112e-6■■■■□ 22
U2AF2P26368 TTC17-201ENST00000039989 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.482e-6■■■■□ 22
U2AF2P26368 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.283e-6■■■■□ 22
U2AF2P26368 ICE2-203ENST00000558181 7060 ntTSL 1 (best)8.02□□□□□ -1.131e-8■■■■□ 22
U2AF2P26368 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.21e-8■■■■□ 22
U2AF2P26368 CFB-274ENST00000461483 1277 ntTSL 512.37□□□□□ -0.433e-62■■■■□ 22
U2AF2P26368 CFB-283ENST00000497841 736 ntTSL 38.95□□□□□ -0.983e-62■■■■□ 22
U2AF2P26368 CFB-275ENST00000465750 568 ntTSL 27.81□□□□□ -1.163e-62■■■■□ 22
U2AF2P26368 SLC25A36-205ENST00000502594 1163 ntTSL 1 (best)19.56■□□□□ 0.724e-8■■■■□ 22
U2AF2P26368 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.05■□□□□ 0.484e-8■■■■□ 22
U2AF2P26368 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.454e-8■■■■□ 22
U2AF2P26368 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.344e-8■■■■□ 22
U2AF2P26368 SLC25A36-215ENST00000631654 620 ntTSL 515.47■□□□□ 0.074e-8■■■■□ 22
U2AF2P26368 SLC25A36-211ENST00000512506 727 ntTSL 58.33□□□□□ -1.087e-9■■■■□ 22
U2AF2P26368 SLC25A36-210ENST00000512023 817 ntTSL 56.96□□□□□ -1.34e-8■■■■□ 22
U2AF2P26368 SRRM2-222ENST00000575009 1146 ntTSL 529.36■■■□□ 2.292e-16■■■■□ 22
U2AF2P26368 SRRM2-229ENST00000576894 2210 ntTSL 1 (best)23.96■■□□□ 1.432e-16■■■■□ 22
U2AF2P26368 SRRM2-230ENST00000576924 3314 ntTSL 1 (best)19.58■□□□□ 0.732e-16■■■■□ 22
U2AF2P26368 SRRM2-208ENST00000571378 2870 ntTSL 1 (best)17.04■□□□□ 0.322e-16■■■■□ 22
U2AF2P26368 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.57■□□□□ 0.082e-16■■■■□ 22
U2AF2P26368 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.522e-8■■■■□ 22
U2AF2P26368 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC13.84□□□□□ -0.197e-9■■■■□ 22
U2AF2P26368 PUM2-204ENST00000403432 3594 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.277e-9■■■■□ 22
U2AF2P26368 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.21□□□□□ -1.267e-9■■■■□ 22
U2AF2P26368 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.287e-9■■■■□ 22
U2AF2P26368 RAPGEF6-215ENST00000627212 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.573e-8■■■■□ 22
U2AF2P26368 MKNK1-218ENST00000525888 588 ntTSL 414.06□□□□□ -0.163e-6■■■■□ 22
U2AF2P26368 MKNK1-225ENST00000531769 567 ntTSL 412.92□□□□□ -0.343e-6■■■■□ 22
U2AF2P26368 MKNK1-226ENST00000532110 494 ntTSL 411.92□□□□□ -0.53e-6■■■■□ 22
U2AF2P26368 MKNK1-210ENST00000474868 540 ntTSL 311.11□□□□□ -0.633e-6■■■■□ 22
U2AF2P26368 MKNK1-222ENST00000529170 530 ntTSL 49.03□□□□□ -0.963e-6■■■■□ 22
U2AF2P26368 MKNK1-207ENST00000465783 464 ntTSL 2 BASIC8.8□□□□□ -13e-6■■■■□ 22
U2AF2P26368 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC7.73□□□□□ -1.174e-6■■■■□ 22
U2AF2P26368 NEDD4L-234ENST00000592097 582 ntTSL 37.6□□□□□ -1.192e-6■■■■□ 22
U2AF2P26368 TNKS1BP1-204ENST00000528882 4336 ntTSL 518.51■□□□□ 0.552e-9■■■■□ 22
U2AF2P26368 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.52e-9■■■■□ 22
U2AF2P26368 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.382e-9■■■■□ 22
U2AF2P26368 EIF4B-203ENST00000420463 1936 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.193e-7■■■■□ 22
U2AF2P26368 EIF4B-202ENST00000416762 1985 ntTSL 2 BASIC13.08□□□□□ -0.323e-7■■■■□ 22
U2AF2P26368 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.943e-7■■■■□ 22
U2AF2P26368 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.21■■□□□ 1.631e-6■■■■□ 22
U2AF2P26368 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.15■■□□□ 1.621e-6■■■■□ 22
U2AF2P26368 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.03■■□□□ 1.61e-6■■■■□ 22
U2AF2P26368 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.19■□□□□ 0.52e-6■■■■□ 22
U2AF2P26368 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC11.71□□□□□ -0.542e-6■■■■□ 22
U2AF2P26368 DNAJC16-205ENST00000475133 6299 ntTSL 1 (best)7.19□□□□□ -1.262e-6■■■■□ 22
U2AF2P26368 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.292e-6■■■■□ 22
U2AF2P26368 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.29□□□□□ -1.42e-6■■■■□ 22
U2AF2P26368 RALGAPA1-209ENST00000554652 4487 ntTSL 25.82□□□□□ -1.481e-7■■■■□ 22
U2AF2P26368 ADD1-215ENST00000510101 704 ntTSL 328.22■■■□□ 2.113e-9■■■■□ 22
U2AF2P26368 ADD1-213ENST00000508684 3059 ntTSL 224.86■■□□□ 1.573e-9■■■■□ 22
U2AF2P26368 ADD1-214ENST00000509039 1569 ntTSL 211.54□□□□□ -0.563e-9■■■■□ 22
U2AF2P26368 ADD1-216ENST00000511797 671 ntTSL 511.4□□□□□ -0.583e-9■■■■□ 22
U2AF2P26368 ADD1-212ENST00000508277 491 ntTSL 511□□□□□ -0.653e-9■■■■□ 22
Retrieved 100 of 36,523 protein–RNA pairs in 200.8 ms