Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNB1P11230 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.22■□□□□ 0.67
CHRNB1P11230 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNB1P11230 AL162741.1-201ENST00000565563 1558 ntBASIC19.22■□□□□ 0.67
CHRNB1P11230 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNB1P11230 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNB1P11230 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHRNB1P11230 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.22■□□□□ 0.67
CHRNB1P11230 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNB1P11230 AL023284.2-201ENST00000405850 579 ntBASIC19.21■□□□□ 0.67
CHRNB1P11230 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNB1P11230 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.21■□□□□ 0.67
CHRNB1P11230 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 AC079602.3-201ENST00000623931 403 ntBASIC19.21■□□□□ 0.67
CHRNB1P11230 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 AC073314.1-201ENST00000568729 2216 ntBASIC19.21■□□□□ 0.67
CHRNB1P11230 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CHRNB1P11230 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRNB1P11230 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CHRNB1P11230 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHRNB1P11230 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNB1P11230 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
CHRNB1P11230 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CHRNB1P11230 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNB1P11230 AC036111.1-201ENST00000533973 1582 ntBASIC19.2■□□□□ 0.66
CHRNB1P11230 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.2■□□□□ 0.66
CHRNB1P11230 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.2■□□□□ 0.66
CHRNB1P11230 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.2■□□□□ 0.66
CHRNB1P11230 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.2■□□□□ 0.66
CHRNB1P11230 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNB1P11230 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHRNB1P11230 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CHRNB1P11230 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNB1P11230 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHRNB1P11230 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNB1P11230 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNB1P11230 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNB1P11230 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNB1P11230 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHRNB1P11230 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNB1P11230 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
CHRNB1P11230 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNB1P11230 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNB1P11230 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHRNB1P11230 HLA-F-220ENST00000434407 884 ntBASIC19.19■□□□□ 0.66
CHRNB1P11230 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHRNB1P11230 SEC1P-202ENST00000473944 940 ntBASIC19.19■□□□□ 0.66
CHRNB1P11230 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CHRNB1P11230 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHRNB1P11230 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNB1P11230 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNB1P11230 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNB1P11230 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNB1P11230 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNB1P11230 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNB1P11230 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNB1P11230 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNB1P11230 AC093525.10-201ENST00000625130 1569 ntBASIC19.19■□□□□ 0.66
CHRNB1P11230 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNB1P11230 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNB1P11230 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNB1P11230 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNB1P11230 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNB1P11230 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNB1P11230 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNB1P11230 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNB1P11230 ZNF815P-204ENST00000434898 1737 ntBASIC19.18■□□□□ 0.66
CHRNB1P11230 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHRNB1P11230 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNB1P11230 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.18■□□□□ 0.66
CHRNB1P11230 CHCHD2P8-201ENST00000429873 447 ntBASIC19.18■□□□□ 0.66
CHRNB1P11230 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.18■□□□□ 0.66
CHRNB1P11230 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNB1P11230 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHRNB1P11230 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.18■□□□□ 0.66
CHRNB1P11230 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNB1P11230 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms