Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.65■□□□□ 0.74
RHOP08100 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.65■□□□□ 0.74
RHOP08100 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.65■□□□□ 0.74
RHOP08100 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 AC092329.2-201ENST00000598402 547 ntBASIC19.65■□□□□ 0.74
RHOP08100 AL121672.3-201ENST00000608644 468 ntBASIC19.65■□□□□ 0.74
RHOP08100 AC079602.3-201ENST00000623931 403 ntBASIC19.65■□□□□ 0.74
RHOP08100 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.65■□□□□ 0.74
RHOP08100 AL157888.1-201ENST00000631930 593 ntBASIC19.65■□□□□ 0.74
RHOP08100 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.65■□□□□ 0.74
RHOP08100 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RHOP08100 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RHOP08100 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RHOP08100 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
RHOP08100 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RHOP08100 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.64■□□□□ 0.74
RHOP08100 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHOP08100 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.64■□□□□ 0.73
RHOP08100 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.64■□□□□ 0.73
RHOP08100 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.64■□□□□ 0.73
RHOP08100 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.64■□□□□ 0.73
RHOP08100 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.64■□□□□ 0.73
RHOP08100 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.64■□□□□ 0.73
RHOP08100 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.64■□□□□ 0.73
RHOP08100 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.64■□□□□ 0.73
RHOP08100 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHOP08100 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHOP08100 AC016734.2-201ENST00000624325 1377 ntBASIC19.64■□□□□ 0.73
RHOP08100 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RHOP08100 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHOP08100 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
RHOP08100 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.64■□□□□ 0.73
RHOP08100 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.64■□□□□ 0.73
RHOP08100 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.64■□□□□ 0.73
RHOP08100 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.64■□□□□ 0.73
RHOP08100 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.64■□□□□ 0.73
RHOP08100 CLDN5-201ENST00000403084 2357 ntBASIC19.64■□□□□ 0.73
RHOP08100 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHOP08100 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHOP08100 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RHOP08100 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RHOP08100 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RHOP08100 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RHOP08100 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.63■□□□□ 0.73
RHOP08100 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.63■□□□□ 0.73
RHOP08100 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.63■□□□□ 0.73
RHOP08100 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
RHOP08100 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.63■□□□□ 0.73
RHOP08100 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RHOP08100 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.63■□□□□ 0.73
RHOP08100 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.63■□□□□ 0.73
RHOP08100 MIR3652-201ENST00000579335 131 ntBASIC19.63■□□□□ 0.73
RHOP08100 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.63■□□□□ 0.73
RHOP08100 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.63■□□□□ 0.73
RHOP08100 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RHOP08100 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 AL162741.1-201ENST00000565563 1558 ntBASIC19.62■□□□□ 0.73
RHOP08100 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.62■□□□□ 0.73
RHOP08100 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RHOP08100 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RHOP08100 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
RHOP08100 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RHOP08100 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.62■□□□□ 0.73
RHOP08100 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.62■□□□□ 0.73
RHOP08100 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RHOP08100 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.62■□□□□ 0.73
RHOP08100 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.62■□□□□ 0.73
RHOP08100 HLA-F-220ENST00000434407 884 ntBASIC19.62■□□□□ 0.73
RHOP08100 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.62■□□□□ 0.73
RHOP08100 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.62■□□□□ 0.73
RHOP08100 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.62■□□□□ 0.73
RHOP08100 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.62■□□□□ 0.73
RHOP08100 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
RHOP08100 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.62■□□□□ 0.73
RHOP08100 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.62■□□□□ 0.73
RHOP08100 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.62■□□□□ 0.73
RHOP08100 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms