Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
LTN1O94822 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
LTN1O94822 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LTN1O94822 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC25.17■■□□□ 1.62
LTN1O94822 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC25.17■■□□□ 1.62
LTN1O94822 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC25.17■■□□□ 1.62
LTN1O94822 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC25.17■■□□□ 1.62
LTN1O94822 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
LTN1O94822 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LTN1O94822 KRT18P23-201ENST00000435622 1283 ntBASIC25.16■■□□□ 1.62
LTN1O94822 FDX1P1-201ENST00000449115 551 ntBASIC25.16■■□□□ 1.62
LTN1O94822 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.16■■□□□ 1.62
LTN1O94822 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LTN1O94822 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC25.16■■□□□ 1.62
LTN1O94822 UNC93B7-201ENST00000509439 705 ntBASIC25.16■■□□□ 1.62
LTN1O94822 MPI-205ENST00000562606 1052 ntTSL 3 BASIC25.16■■□□□ 1.62
LTN1O94822 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
LTN1O94822 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC25.16■■□□□ 1.62
LTN1O94822 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC25.16■■□□□ 1.62
LTN1O94822 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
LTN1O94822 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC25.16■■□□□ 1.62
LTN1O94822 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LTN1O94822 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC25.16■■□□□ 1.62
LTN1O94822 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LTN1O94822 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
LTN1O94822 PVRIG2P-201ENST00000435460 978 ntBASIC25.16■■□□□ 1.62
LTN1O94822 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC25.16■■□□□ 1.62
LTN1O94822 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
LTN1O94822 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC25.15■■□□□ 1.62
LTN1O94822 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LTN1O94822 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
LTN1O94822 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LTN1O94822 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC25.15■■□□□ 1.62
LTN1O94822 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC25.15■■□□□ 1.62
LTN1O94822 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
LTN1O94822 AC004870.1-201ENST00000315132 882 ntBASIC25.15■■□□□ 1.62
LTN1O94822 MIR662-201ENST00000384847 95 ntBASIC25.15■■□□□ 1.62
LTN1O94822 TSPY12P-201ENST00000421279 868 ntBASIC25.15■■□□□ 1.62
LTN1O94822 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
LTN1O94822 TOB2P1-201ENST00000469761 992 ntBASIC25.15■■□□□ 1.62
LTN1O94822 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LTN1O94822 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC25.15■■□□□ 1.62
LTN1O94822 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
LTN1O94822 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC25.15■■□□□ 1.62
LTN1O94822 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LTN1O94822 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC25.15■■□□□ 1.62
LTN1O94822 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LTN1O94822 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
LTN1O94822 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LTN1O94822 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC25.15■■□□□ 1.62
LTN1O94822 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
LTN1O94822 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC25.14■■□□□ 1.62
LTN1O94822 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LTN1O94822 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
LTN1O94822 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
LTN1O94822 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
LTN1O94822 AC008556.1-201ENST00000610908 2040 ntBASIC25.14■■□□□ 1.62
LTN1O94822 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LTN1O94822 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC25.14■■□□□ 1.62
LTN1O94822 EMBP1-201ENST00000458200 901 ntBASIC25.14■■□□□ 1.62
LTN1O94822 BMF-207ENST00000559701 630 ntTSL 3 BASIC25.14■■□□□ 1.62
LTN1O94822 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.14■■□□□ 1.62
LTN1O94822 AC011498.5-201ENST00000592027 486 ntBASIC25.14■■□□□ 1.62
LTN1O94822 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
LTN1O94822 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
LTN1O94822 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LTN1O94822 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LTN1O94822 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.14■■□□□ 1.61
LTN1O94822 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
LTN1O94822 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
LTN1O94822 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
LTN1O94822 AL109659.2-201ENST00000606809 1674 ntBASIC25.14■■□□□ 1.61
LTN1O94822 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTN1O94822 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC25.13■■□□□ 1.61
LTN1O94822 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC25.13■■□□□ 1.61
LTN1O94822 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
LTN1O94822 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTN1O94822 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTN1O94822 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
LTN1O94822 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LTN1O94822 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC25.13■■□□□ 1.61
LTN1O94822 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC25.13■■□□□ 1.61
LTN1O94822 LINC00167-201ENST00000530583 1419 ntBASIC25.13■■□□□ 1.61
LTN1O94822 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTN1O94822 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC25.13■■□□□ 1.61
LTN1O94822 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTN1O94822 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTN1O94822 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC25.13■■□□□ 1.61
LTN1O94822 KRT17P6-201ENST00000453795 1220 ntBASIC25.13■■□□□ 1.61
LTN1O94822 AC074051.2-201ENST00000565115 352 ntBASIC25.13■■□□□ 1.61
LTN1O94822 KLK8-205ENST00000593490 267 ntTSL 3 BASIC25.13■■□□□ 1.61
LTN1O94822 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
LTN1O94822 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
LTN1O94822 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
LTN1O94822 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC25.13■■□□□ 1.61
LTN1O94822 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTN1O94822 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTN1O94822 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LTN1O94822 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms