Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.3■■□□□ 1
ACTN4O43707 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.3■■□□□ 1
ACTN4O43707 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.29■■□□□ 1
ACTN4O43707 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.29■■□□□ 1
ACTN4O43707 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.29■■□□□ 1
ACTN4O43707 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ACTN4O43707 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ACTN4O43707 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ACTN4O43707 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.29■■□□□ 1
ACTN4O43707 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ACTN4O43707 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.29■■□□□ 1
ACTN4O43707 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.29■■□□□ 1
ACTN4O43707 RPS2P4-201ENST00000476944 856 ntBASIC21.29■■□□□ 1
ACTN4O43707 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.29■■□□□ 1
ACTN4O43707 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.29■■□□□ 1
ACTN4O43707 AL353708.3-201ENST00000610272 989 ntBASIC21.29■■□□□ 1
ACTN4O43707 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.29■■□□□ 1
ACTN4O43707 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ACTN4O43707 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.29■■□□□ 1
ACTN4O43707 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ACTN4O43707 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ACTN4O43707 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
ACTN4O43707 HTR7P1-201ENST00000538670 1336 ntBASIC21.29■■□□□ 1
ACTN4O43707 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.29■■□□□ 1
ACTN4O43707 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
ACTN4O43707 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.28■■□□□ 1
ACTN4O43707 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.28■■□□□ 1
ACTN4O43707 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.28■■□□□ 1
ACTN4O43707 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ACTN4O43707 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.28■■□□□ 1
ACTN4O43707 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.28■■□□□ 1
ACTN4O43707 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.28■■□□□ 1
ACTN4O43707 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ACTN4O43707 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.28■■□□□ 1
ACTN4O43707 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.28■■□□□ 1
ACTN4O43707 AC090164.3-201ENST00000610780 2143 ntBASIC21.28■■□□□ 1
ACTN4O43707 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.28■■□□□ 1
ACTN4O43707 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.28■■□□□ 1
ACTN4O43707 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.27■■□□□ 1
ACTN4O43707 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ACTN4O43707 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ACTN4O43707 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.27■■□□□ 1
ACTN4O43707 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ACTN4O43707 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
ACTN4O43707 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.27■■□□□ 1
ACTN4O43707 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.27■■□□□ 1
ACTN4O43707 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.27■■□□□ 1
ACTN4O43707 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ACTN4O43707 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.27■■□□□ 1
ACTN4O43707 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.27■■□□□ 1
ACTN4O43707 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
ACTN4O43707 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ACTN4O43707 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ACTN4O43707 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
ACTN4O43707 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.26■□□□□ 0.99
ACTN4O43707 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.26■□□□□ 0.99
ACTN4O43707 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ACTN4O43707 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.26■□□□□ 0.99
ACTN4O43707 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ACTN4O43707 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.26■□□□□ 0.99
ACTN4O43707 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.26■□□□□ 0.99
ACTN4O43707 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.26■□□□□ 0.99
ACTN4O43707 C1QBPP2-201ENST00000528754 825 ntBASIC21.26■□□□□ 0.99
ACTN4O43707 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.26■□□□□ 0.99
ACTN4O43707 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ACTN4O43707 AC131212.4-201ENST00000623606 975 ntBASIC21.26■□□□□ 0.99
ACTN4O43707 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.26■□□□□ 0.99
ACTN4O43707 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.26■□□□□ 0.99
ACTN4O43707 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 RCC2P6-201ENST00000526625 1557 ntBASIC21.26■□□□□ 0.99
ACTN4O43707 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ACTN4O43707 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.26■□□□□ 0.99
ACTN4O43707 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ACTN4O43707 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
ACTN4O43707 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
ACTN4O43707 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.25■□□□□ 0.99
ACTN4O43707 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ACTN4O43707 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms