Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 AL023284.2-201ENST00000405850 579 ntBASIC19.17■□□□□ 0.66
SMAD6O43541 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 AC117947.1-201ENST00000427448 529 ntBASIC19.17■□□□□ 0.66
SMAD6O43541 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD6O43541 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SMAD6O43541 AL049812.1-201ENST00000432563 2267 ntBASIC19.17■□□□□ 0.66
SMAD6O43541 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD6O43541 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SMAD6O43541 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMAD6O43541 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMAD6O43541 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD6O43541 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD6O43541 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMAD6O43541 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
SMAD6O43541 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SMAD6O43541 DUX4L26-201ENST00000489078 1255 ntBASIC19.16■□□□□ 0.66
SMAD6O43541 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 AL049597.2-201ENST00000565575 961 ntBASIC19.16■□□□□ 0.66
SMAD6O43541 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD6O43541 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMAD6O43541 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMAD6O43541 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SMAD6O43541 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD6O43541 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD6O43541 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.15■□□□□ 0.66
SMAD6O43541 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.15■□□□□ 0.66
SMAD6O43541 AL161938.1-201ENST00000569833 2180 ntBASIC19.15■□□□□ 0.66
SMAD6O43541 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SMAD6O43541 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.15■□□□□ 0.66
SMAD6O43541 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SMAD6O43541 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.15■□□□□ 0.66
SMAD6O43541 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMAD6O43541 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.15■□□□□ 0.66
SMAD6O43541 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 CR769767.2-201ENST00000622735 460 ntBASIC19.15■□□□□ 0.66
SMAD6O43541 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.15■□□□□ 0.66
SMAD6O43541 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.15■□□□□ 0.66
SMAD6O43541 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.15■□□□□ 0.66
SMAD6O43541 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SMAD6O43541 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
SMAD6O43541 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SMAD6O43541 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD6O43541 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SMAD6O43541 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMAD6O43541 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.14■□□□□ 0.66
SMAD6O43541 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMAD6O43541 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.14■□□□□ 0.66
SMAD6O43541 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMAD6O43541 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.14■□□□□ 0.65
SMAD6O43541 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.14■□□□□ 0.65
SMAD6O43541 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.14■□□□□ 0.65
SMAD6O43541 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SMAD6O43541 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.14■□□□□ 0.65
SMAD6O43541 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.14■□□□□ 0.65
SMAD6O43541 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.14■□□□□ 0.65
SMAD6O43541 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.14■□□□□ 0.65
SMAD6O43541 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SMAD6O43541 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SMAD6O43541 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD6O43541 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms