Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.3■□□□□ 0.84
SPTLC1O15269 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SPTLC1O15269 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.3■□□□□ 0.84
SPTLC1O15269 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPTLC1O15269 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTLC1O15269 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SPTLC1O15269 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTLC1O15269 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC1O15269 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SPTLC1O15269 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SPTLC1O15269 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTLC1O15269 BX664615.1-201ENST00000443558 458 ntBASIC20.29■□□□□ 0.84
SPTLC1O15269 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC1O15269 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTLC1O15269 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.29■□□□□ 0.84
SPTLC1O15269 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SPTLC1O15269 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.29■□□□□ 0.84
SPTLC1O15269 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.29■□□□□ 0.84
SPTLC1O15269 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 GPAT2P1-201ENST00000444924 1672 ntBASIC20.29■□□□□ 0.84
SPTLC1O15269 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPTLC1O15269 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.28■□□□□ 0.84
SPTLC1O15269 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SPTLC1O15269 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 FEM1AP3-201ENST00000403722 1741 ntBASIC20.28■□□□□ 0.84
SPTLC1O15269 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SPTLC1O15269 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.28■□□□□ 0.84
SPTLC1O15269 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.28■□□□□ 0.84
SPTLC1O15269 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.28■□□□□ 0.84
SPTLC1O15269 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SPTLC1O15269 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPTLC1O15269 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.28■□□□□ 0.84
SPTLC1O15269 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SPTLC1O15269 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 KRT8P3-201ENST00000519669 1449 ntBASIC20.27■□□□□ 0.84
SPTLC1O15269 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.27■□□□□ 0.84
SPTLC1O15269 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.27■□□□□ 0.84
SPTLC1O15269 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.27■□□□□ 0.84
SPTLC1O15269 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTLC1O15269 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.27■□□□□ 0.84
SPTLC1O15269 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SPTLC1O15269 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SPTLC1O15269 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SPTLC1O15269 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.27■□□□□ 0.84
SPTLC1O15269 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTLC1O15269 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.27■□□□□ 0.84
SPTLC1O15269 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
SPTLC1O15269 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.27■□□□□ 0.84
SPTLC1O15269 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPTLC1O15269 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.27■□□□□ 0.83
SPTLC1O15269 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SPTLC1O15269 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
SPTLC1O15269 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTLC1O15269 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC1O15269 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC1O15269 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC1O15269 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
SPTLC1O15269 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.26■□□□□ 0.83
SPTLC1O15269 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC1O15269 WWOX-216ENST00000569818 525 ntBASIC20.26■□□□□ 0.83
SPTLC1O15269 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.26■□□□□ 0.83
SPTLC1O15269 AC116562.4-201ENST00000641316 2276 ntBASIC20.26■□□□□ 0.83
SPTLC1O15269 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC1O15269 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC1O15269 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPTLC1O15269 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms