Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HMGN4O00479 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
HMGN4O00479 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN4O00479 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGN4O00479 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN4O00479 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGN4O00479 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
HMGN4O00479 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGN4O00479 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
HMGN4O00479 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HMGN4O00479 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGN4O00479 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGN4O00479 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.65■□□□□ 0.42
HMGN4O00479 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 HTR7P1-201ENST00000538670 1336 ntBASIC17.65■□□□□ 0.42
HMGN4O00479 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HMGN4O00479 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGN4O00479 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.64■□□□□ 0.42
HMGN4O00479 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.42
HMGN4O00479 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGN4O00479 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGN4O00479 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
HMGN4O00479 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGN4O00479 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGN4O00479 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGN4O00479 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 RPS2P4-201ENST00000476944 856 ntBASIC17.64■□□□□ 0.41
HMGN4O00479 AP002982.1-201ENST00000492365 877 ntBASIC17.64■□□□□ 0.41
HMGN4O00479 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGN4O00479 C1QBPP2-201ENST00000528754 825 ntBASIC17.64■□□□□ 0.41
HMGN4O00479 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HMGN4O00479 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HMGN4O00479 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGN4O00479 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGN4O00479 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HMGN4O00479 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGN4O00479 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGN4O00479 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN4O00479 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
HMGN4O00479 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HMGN4O00479 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HMGN4O00479 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN4O00479 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
HMGN4O00479 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN4O00479 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.63■□□□□ 0.41
HMGN4O00479 KSR1P1-201ENST00000446298 240 ntBASIC17.63■□□□□ 0.41
HMGN4O00479 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HMGN4O00479 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
HMGN4O00479 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.63■□□□□ 0.41
HMGN4O00479 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HMGN4O00479 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.63■□□□□ 0.41
HMGN4O00479 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms