Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX39AO00148 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX39AO00148 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
DDX39AO00148 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
DDX39AO00148 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
DDX39AO00148 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
DDX39AO00148 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
DDX39AO00148 AL138966.2-201ENST00000621997 464 ntBASIC21.33■■□□□ 1.01
DDX39AO00148 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
DDX39AO00148 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
DDX39AO00148 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.33■■□□□ 1
DDX39AO00148 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.33■■□□□ 1
DDX39AO00148 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.33■■□□□ 1
DDX39AO00148 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.33■■□□□ 1
DDX39AO00148 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.32■■□□□ 1
DDX39AO00148 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 AC141586.3-201ENST00000562166 1838 ntBASIC21.32■■□□□ 1
DDX39AO00148 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
DDX39AO00148 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.32■■□□□ 1
DDX39AO00148 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.32■■□□□ 1
DDX39AO00148 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
DDX39AO00148 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
DDX39AO00148 DUX4L26-201ENST00000489078 1255 ntBASIC21.32■■□□□ 1
DDX39AO00148 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.32■■□□□ 1
DDX39AO00148 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.32■■□□□ 1
DDX39AO00148 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 AC139887.4-201ENST00000607877 719 ntBASIC21.32■■□□□ 1
DDX39AO00148 AC141257.4-201ENST00000634557 245 ntBASIC21.32■■□□□ 1
DDX39AO00148 AC136944.6-201ENST00000634818 245 ntBASIC21.32■■□□□ 1
DDX39AO00148 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.32■■□□□ 1
DDX39AO00148 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
DDX39AO00148 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
DDX39AO00148 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.32■■□□□ 1
DDX39AO00148 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
DDX39AO00148 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
DDX39AO00148 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.31■■□□□ 1
DDX39AO00148 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.31■■□□□ 1
DDX39AO00148 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.31■■□□□ 1
DDX39AO00148 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 AC117947.1-201ENST00000427448 529 ntBASIC21.31■■□□□ 1
DDX39AO00148 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.31■■□□□ 1
DDX39AO00148 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.31■■□□□ 1
DDX39AO00148 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.31■■□□□ 1
DDX39AO00148 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.31■■□□□ 1
DDX39AO00148 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.31■■□□□ 1
DDX39AO00148 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.31■■□□□ 1
DDX39AO00148 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
DDX39AO00148 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.31■■□□□ 1
DDX39AO00148 GPAT2P1-201ENST00000444924 1672 ntBASIC21.31■■□□□ 1
DDX39AO00148 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DDX39AO00148 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.3■■□□□ 1
DDX39AO00148 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.3■■□□□ 1
DDX39AO00148 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
DDX39AO00148 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.3■■□□□ 1
DDX39AO00148 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.3■■□□□ 1
DDX39AO00148 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DDX39AO00148 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.3■■□□□ 1
DDX39AO00148 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.3■■□□□ 1
DDX39AO00148 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
DDX39AO00148 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.3■■□□□ 1
DDX39AO00148 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
DDX39AO00148 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.3■■□□□ 1
DDX39AO00148 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.3■■□□□ 1
DDX39AO00148 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.3■■□□□ 1
DDX39AO00148 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.29■■□□□ 1
DDX39AO00148 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
DDX39AO00148 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
DDX39AO00148 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms