Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 AL390719.2-201ENST00000606993 987 ntBASIC18.12■□□□□ 0.49
CNOT1A5YKK6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 RPSAP43-201ENST00000402237 625 ntBASIC18.12■□□□□ 0.49
CNOT1A5YKK6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 AC134684.3-201ENST00000641758 218 ntBASIC18.12■□□□□ 0.49
CNOT1A5YKK6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CNOT1A5YKK6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 EP400NL-214ENST00000641289 2402 ntBASIC18.11■□□□□ 0.49
CNOT1A5YKK6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 HNRNPDP1-201ENST00000439535 754 ntBASIC18.11■□□□□ 0.49
CNOT1A5YKK6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 BNIP3P18-201ENST00000593976 575 ntBASIC18.11■□□□□ 0.49
CNOT1A5YKK6 AL592071.1-201ENST00000611956 408 ntBASIC18.11■□□□□ 0.49
CNOT1A5YKK6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT1A5YKK6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 YBX2P1-201ENST00000394192 760 ntBASIC18.1■□□□□ 0.49
CNOT1A5YKK6 UPF3AP3-201ENST00000420996 769 ntBASIC18.1■□□□□ 0.49
CNOT1A5YKK6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 MIR7706-201ENST00000613747 67 ntBASIC18.1■□□□□ 0.49
CNOT1A5YKK6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT1A5YKK6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
CNOT1A5YKK6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT1A5YKK6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.09■□□□□ 0.49
CNOT1A5YKK6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT1A5YKK6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT1A5YKK6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT1A5YKK6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT1A5YKK6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms