Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF103-CHMP3A0A140T963 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 AC092666.2-201ENST00000613287 246 ntBASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF103-CHMP3A0A140T963 AP006587.1-201ENST00000534129 1502 ntBASIC18.27■□□□□ 0.51
RNF103-CHMP3A0A140T963 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF103-CHMP3A0A140T963 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RNF103-CHMP3A0A140T963 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
RNF103-CHMP3A0A140T963 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF103-CHMP3A0A140T963 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RNF103-CHMP3A0A140T963 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZNF815P-204ENST00000434898 1737 ntBASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 YBX1P10-201ENST00000444752 975 ntBASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 SOX15-203ENST00000570788 1093 ntBASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RNF103-CHMP3A0A140T963 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RNF103-CHMP3A0A140T963 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms