Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 CD276-203ENST00000537340 2439 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 AC012313.1-201ENST00000593393 3059 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DUX4L2-201ENST00000561772 1275 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 CCDC92B-201ENST00000575506 885 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 MIR4767-201ENST00000582827 78 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DUX4L6-201ENST00000626483 1275 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DUX4L1-201ENST00000627662 1275 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DUX4L8-201ENST00000629013 1275 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DUX4L3-201ENST00000630187 1275 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DUX4L7-201ENST00000630678 1275 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 DUX4L5-201ENST00000630834 1275 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ZNF815P-204ENST00000434898 1737 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 FLJ16779-201ENST00000612722 7638 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 AC073592.3-201ENST00000625118 1834 ntBASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
TRAV13-2A0A0B4J235 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
TRAV13-2A0A0B4J235 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 MIR572-201ENST00000384983 95 ntBASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 GRAMD4P2-201ENST00000423297 1097 ntBASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 SLC7A5P2-201ENST00000553010 536 ntBASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 SRR-208ENST00000576848 588 ntTSL 4 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 FGF8-207ENST00000618991 856 ntTSL 3 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 RBM17P2-201ENST00000616397 1405 ntBASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
TRAV13-2A0A0B4J235 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TRAV13-2A0A0B4J235 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms