Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 KRT87P-202ENST00000534226 1464 ntBASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 AC108860.2-201ENST00000562760 2183 ntBASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 AC010141.2-201ENST00000452426 721 ntBASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TRAV9-1A0A075B6T8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 AC080080.1-201ENST00000625121 2420 ntBASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV9-1A0A075B6T8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 AC239859.2-201ENST00000444165 318 ntBASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms