Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 STX3-208ENST00000641815 3236 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 RNU1-94P-201ENST00000362627 173 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 RNU6-219P-201ENST00000364728 107 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 SNORA70.6-201ENST00000383934 134 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 MIR129-1-201ENST00000384972 72 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 RNA5SP372-201ENST00000390836 115 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 U8.17-201ENST00000391292 132 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 SDHCP2-201ENST00000398565 501 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 RNU7-164P-201ENST00000459221 62 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 RNU6-693P-201ENST00000516134 107 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 RNU6-795P-201ENST00000516323 103 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 RNU6-1073P-201ENST00000517182 106 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 AP001880.2-201ENST00000538233 448 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 MIR3944-201ENST00000581277 108 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 AC091152.3-201ENST00000604227 325 ntBASIC4.77□□□□□ -1.65
LHX6Q9UPM6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
LHX6Q9UPM6 AC007656.2-201ENST00000624902 4547 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 MAPK10-349ENST00000641767 3661 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 Y_RNA.96-201ENST00000363092 109 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 SNORD46.1-201ENST00000364139 104 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 MIR548A2-201ENST00000384956 97 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 RNA5SP296-201ENST00000410523 111 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 NDUFA4P2-201ENST00000489989 244 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 SNORD19.2-201ENST00000516978 73 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 AC011602.1-201ENST00000546484 331 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 MIR4444-1-201ENST00000581696 74 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 MIR4444-2-201ENST00000584390 74 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 MIR6133-201ENST00000617057 108 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 MIR376A2-201ENST00000636782 80 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 AC000403.1-201ENST00000613696 3585 ntBASIC4.76□□□□□ -1.65
LHX6Q9UPM6 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LHX6Q9UPM6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 AC112198.2-201ENST00000426589 6996 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 snoU2_19.1-201ENST00000362361 80 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 RNU6-975P-201ENST00000384296 105 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 SNORA70C-201ENST00000384538 135 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 RNU6-57P-201ENST00000411348 103 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 MRPL35P3-201ENST00000421557 364 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 RPL35AP21-201ENST00000437667 333 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 RNU2-11P-201ENST00000459191 187 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 ENPP7P9-201ENST00000514456 627 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 RNU7-123P-201ENST00000515911 60 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 MIR4694-201ENST00000578534 80 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 MIR6075-201ENST00000620782 95 ntBASIC4.75□□□□□ -1.65
LHX6Q9UPM6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LHX6Q9UPM6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX6Q9UPM6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LHX6Q9UPM6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX6Q9UPM6 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
LHX6Q9UPM6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.74□□□□□ -1.65
LHX6Q9UPM6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LHX6Q9UPM6 SNORD115-35-201ENST00000365122 82 ntBASIC4.74□□□□□ -1.65
LHX6Q9UPM6 RNU6-418P-201ENST00000384035 107 ntBASIC4.74□□□□□ -1.65
LHX6Q9UPM6 Y_RNA.507-201ENST00000384500 99 ntBASIC4.74□□□□□ -1.65
LHX6Q9UPM6 HSPE1P12-201ENST00000412576 301 ntBASIC4.74□□□□□ -1.65
LHX6Q9UPM6 RPL30P4-201ENST00000429309 333 ntBASIC4.74□□□□□ -1.65
LHX6Q9UPM6 VDAC1P3-201ENST00000434069 851 ntBASIC4.74□□□□□ -1.65
LHX6Q9UPM6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.74□□□□□ -1.65
LHX6Q9UPM6 RPS29P10-201ENST00000439197 166 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms